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The map label for this gene is 22126961

Identifier: 22126961

GI number: 22126961

Start: 3395417

End: 3396313

Strand: Direct

Name: 22126961

Synonym: y3085

Alternate gene names: NA

Gene position: 3395417-3396313 (Clockwise)

Preceding gene: 22126960

Following gene: 22126962

Centisome position: 73.8

GC content: 52.06

Gene sequence:

>897_bases
ATGTTCGTAATGAGTCGGTTAAGTCGTGAGATGAAAATGCTGGCAAAACAAGCTGGCGGTAGCCATAAAACCGTTCATGA
TCGTATTCGGATTATGGACAGGTTTAGCCGCCATCTGCTGGCCCTTAATATTCAGGTGCGTGATGTTAAACACCTAAAAG
CAAAGCATATTGAAAGTTATATTACTGACCGTTTTTCACAGGGGATCGCGATCCGTTCTCTTCATAACGAAATGGCGGCA
TTGCGCACCGTTTTCAGATTCGCTGGTCGGGATAAAATCGTCTTATCAGAACGATTAACCAACAAAGCATTGGGGTTAGG
TGGAGCCAGCCGCGCCGGTAGCAAATTCGCTATCCCTGAGGAGGTGTATCAAGCCGCTCTGCGCACCGCCCAACAGCAAG
ACAAAGGACTCGCCTGCGCCCTTCAGCTTGCCCGCCTGCTGGGGCTGCGTTCACAAGAGGCGGTGCAATGCGCCAACTCG
TTGAAAACATGGCAAAAGGAGCTTGAGCAGAACCGGTCTAAACTAACCGTGGTGTTTGGCACCAAGGGAGGCCGCTCACG
CGAAACCCGCATTCTGGATCCTGAAGCAGTCAAACGGGCAGTCAAAGAAGCGCAACAGATCGCCGAAACACGCGGCGGCA
AACTTATTGATAAACCTGACCTGAAAACCGCGATGAATTTCTGGCGCTCCCATACCACCCGCTTAGGGCTGACCGGACAT
TACTCCCCCCACAGCCTGCGCTATGCCTGGGCGCAAGACGCTATTAATTATTACCTCGCCGCAGGATTTAGCCGCATTGA
AGCCAGAGCGTTAACGTCAATGGATCTGGGTCATGGTGATGGCCGTGGCCGCTATGTTGAACGCGTTTATACCCGCAAGG
AGGCGAACTATGTCTGA

Upstream 100 bases:

>100_bases
CTCAACTGCTGCCCGCTCTGGCGCACAGGTATCGTTCAAGGCAGATAACCTGCCATTCCCCATGCGCCAGAGAAATGCAG
CTAGTTGAAATTGTTGGGAG

Downstream 100 bases:

>100_bases
TATTAATTTGATCCGCTTACCTGAAGTGATTGAGAAAATACGACTGAAAAAATCATCAATTTATCATTTGATTAGCCTCA
ATCAATTCCCTCGCCCAATA

Product: putative DNA-binding prophage protein

Products: NA

Alternate protein names: Phage Integrase

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MFVMSRLSREMKMLAKQAGGSHKTVHDRIRIMDRFSRHLLALNIQVRDVKHLKAKHIESYITDRFSQGIAIRSLHNEMAA
LRTVFRFAGRDKIVLSERLTNKALGLGGASRAGSKFAIPEEVYQAALRTAQQQDKGLACALQLARLLGLRSQEAVQCANS
LKTWQKELEQNRSKLTVVFGTKGGRSRETRILDPEAVKRAVKEAQQIAETRGGKLIDKPDLKTAMNFWRSHTTRLGLTGH
YSPHSLRYAWAQDAINYYLAAGFSRIEARALTSMDLGHGDGRGRYVERVYTRKEANYV

Sequences:

>Translated_298_residues
MFVMSRLSREMKMLAKQAGGSHKTVHDRIRIMDRFSRHLLALNIQVRDVKHLKAKHIESYITDRFSQGIAIRSLHNEMAA
LRTVFRFAGRDKIVLSERLTNKALGLGGASRAGSKFAIPEEVYQAALRTAQQQDKGLACALQLARLLGLRSQEAVQCANS
LKTWQKELEQNRSKLTVVFGTKGGRSRETRILDPEAVKRAVKEAQQIAETRGGKLIDKPDLKTAMNFWRSHTTRLGLTGH
YSPHSLRYAWAQDAINYYLAAGFSRIEARALTSMDLGHGDGRGRYVERVYTRKEANYV
>Mature_298_residues
MFVMSRLSREMKMLAKQAGGSHKTVHDRIRIMDRFSRHLLALNIQVRDVKHLKAKHIESYITDRFSQGIAIRSLHNEMAA
LRTVFRFAGRDKIVLSERLTNKALGLGGASRAGSKFAIPEEVYQAALRTAQQQDKGLACALQLARLLGLRSQEAVQCANS
LKTWQKELEQNRSKLTVVFGTKGGRSRETRILDPEAVKRAVKEAQQIAETRGGKLIDKPDLKTAMNFWRSHTTRLGLTGH
YSPHSLRYAWAQDAINYYLAAGFSRIEARALTSMDLGHGDGRGRYVERVYTRKEANYV

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33681; Mature: 33681

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVMSRLSREMKMLAKQAGGSHKTVHDRIRIMDRFSRHLLALNIQVRDVKHLKAKHIESY
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHH
ITDRFSQGIAIRSLHNEMAALRTVFRFAGRDKIVLSERLTNKALGLGGASRAGSKFAIPE
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCHH
EVYQAALRTAQQQDKGLACALQLARLLGLRSQEAVQCANSLKTWQKELEQNRSKLTVVFG
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
TKGGRSRETRILDPEAVKRAVKEAQQIAETRGGKLIDKPDLKTAMNFWRSHTTRLGLTGH
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCC
YSPHSLRYAWAQDAINYYLAAGFSRIEARALTSMDLGHGDGRGRYVERVYTRKEANYV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFVMSRLSREMKMLAKQAGGSHKTVHDRIRIMDRFSRHLLALNIQVRDVKHLKAKHIESY
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHH
ITDRFSQGIAIRSLHNEMAALRTVFRFAGRDKIVLSERLTNKALGLGGASRAGSKFAIPE
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCHH
EVYQAALRTAQQQDKGLACALQLARLLGLRSQEAVQCANSLKTWQKELEQNRSKLTVVFG
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
TKGGRSRETRILDPEAVKRAVKEAQQIAETRGGKLIDKPDLKTAMNFWRSHTTRLGLTGH
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCC
YSPHSLRYAWAQDAINYYLAAGFSRIEARALTSMDLGHGDGRGRYVERVYTRKEANYV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA