| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126959
Identifier: 22126959
GI number: 22126959
Start: 3392560
End: 3394050
Strand: Direct
Name: 22126959
Synonym: y3083
Alternate gene names: NA
Gene position: 3392560-3394050 (Clockwise)
Preceding gene: 22126958
Following gene: 22126960
Centisome position: 73.74
GC content: 33.07
Gene sequence:
>1491_bases ATGAAAAAATTAATACTAAAGAAGATCATGATACTCTCAGATTCAGGAAAATCCGCGAGGCAATTCGAGTTCGGAGAGCA TCTAACACTGATAACAGCAGATGATGATAATAGCGTAGGGAAATCTACGCTTGCAAAAATGATTTTTTGGACTTTTGGCT GTGAGCCCATTTTTTCCGAGGTTTGGAGAACATTAGACTGTACATCAATTATAGAGTTTGAGATAAATAATGCACCTTAC ATTATTCATAGATATAAAAATGAAATTAAAATTAGGCATAGCAATGGTAAACTACACAGTTTCCCAAAAATAACCGGTGA TTATTCAAAGTATTTTTCAGAACTTGTTAATTTTAATGTATTACTCCCTAAGAAAGGTCAATTAACACTAGAAACCCCTC CACCTGCATATTACTTCATACCCTTTTATATTGACCAAAAAAGAACATGGGCTAAACCTTGGGATAGTTTCGAGAATCTT CAGCAATATAGTAGCTGGGCAAAACCAGTCATCTCCTACCACTCAGGATTATTTATAAAAGCACACTTTGAAGTTGAAAA AGATATTTATGTAATAAAAAGAGAGTTAGAAGAAGTTGAGAAAGGCGTTACTGAACTGAATAATGCAGTTATAATACTCA GGCAAAACCTTATCGATACAGACAATGTACTTCCTTCGACCGAGTTTATTTTTAGTGTTATACAAGAATCAGAAAAAAAC AAAAAAAACCTTCTTGAAGAAAGAACTAACTTAAGAGTTGAAAAAATACGACTTGAGTCGCAAATCAAATTAGCCAAAGG GATTATTAGTGAGCTAGATAAAGATTATATTTTTTCCGTCGAAAACATGGAAGATGGTGACATAGAGTGCCCAACATGTG GAACAATACATGAAAATTCTATAGCACATCGCACTAGCATTTTGATTGATATGGAACTTGCAAAAAACCAACTCGAATCC TTAGAGTCAGAAGTCAACGGAATAATAAATTTGCTAGTTATAAAAGATGAGGAGATTACAGAGCAAAGCAATAAGAGCGA ACGAAGTTATAATAATGTCATTGAAAGTGACTCCAATTCGTTAATATCATTCACCAATGATAAGTTTGAAAAACGCGCAC ACGAAATAAATAGTAAAAAAAATATAACCATTGAAATTAAAAAATCAGAAGAAAAAACAGCAAAAAAATCTCAAAGTGAC ATACTATCCAAGGAACAAAAAAGTGAAATAAAGCAAAGCTTCGCAGATAGATTATCGAAATACATAACAAAATTAAAAGT TAACGTTGACATATCTAAAATAAAAAGCCCTCTTGATTATAAAAAAATATATGAAGTAGGCGGTGCAGCAGAAGATGCAA GGGCTGTCCTTGGTTATTATTTAGCAATTTATGAACAAGTAGCGGACTCATGTGAAGAAGCATTGCCACCTTTGGTTATT GATACCCCAAACCAACAAGAACAAGCAAGGGGAATTATACCAACATTATAA
Upstream 100 bases:
>100_bases TTTCTATATCATCTGCGATCATTTACGAAATGGTAGAGGCAACAAACTAAAATGGAAAAAAACTACAAGCTATTGGTTCG AAGCTTAAGGATGAAGGTTT
Downstream 100 bases:
>100_bases AATCAATTTCTGACGGCATAAATAATGATAGGCAATATGTTATATGTGCCATGGAACACAAAGCCTTAGAGCAAATAAAA ACAAATGCTCAAGTAATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MKKLILKKIMILSDSGKSARQFEFGEHLTLITADDDNSVGKSTLAKMIFWTFGCEPIFSEVWRTLDCTSIIEFEINNAPY IIHRYKNEIKIRHSNGKLHSFPKITGDYSKYFSELVNFNVLLPKKGQLTLETPPPAYYFIPFYIDQKRTWAKPWDSFENL QQYSSWAKPVISYHSGLFIKAHFEVEKDIYVIKRELEEVEKGVTELNNAVIILRQNLIDTDNVLPSTEFIFSVIQESEKN KKNLLEERTNLRVEKIRLESQIKLAKGIISELDKDYIFSVENMEDGDIECPTCGTIHENSIAHRTSILIDMELAKNQLES LESEVNGIINLLVIKDEEITEQSNKSERSYNNVIESDSNSLISFTNDKFEKRAHEINSKKNITIEIKKSEEKTAKKSQSD ILSKEQKSEIKQSFADRLSKYITKLKVNVDISKIKSPLDYKKIYEVGGAAEDARAVLGYYLAIYEQVADSCEEALPPLVI DTPNQQEQARGIIPTL
Sequences:
>Translated_496_residues MKKLILKKIMILSDSGKSARQFEFGEHLTLITADDDNSVGKSTLAKMIFWTFGCEPIFSEVWRTLDCTSIIEFEINNAPY IIHRYKNEIKIRHSNGKLHSFPKITGDYSKYFSELVNFNVLLPKKGQLTLETPPPAYYFIPFYIDQKRTWAKPWDSFENL QQYSSWAKPVISYHSGLFIKAHFEVEKDIYVIKRELEEVEKGVTELNNAVIILRQNLIDTDNVLPSTEFIFSVIQESEKN KKNLLEERTNLRVEKIRLESQIKLAKGIISELDKDYIFSVENMEDGDIECPTCGTIHENSIAHRTSILIDMELAKNQLES LESEVNGIINLLVIKDEEITEQSNKSERSYNNVIESDSNSLISFTNDKFEKRAHEINSKKNITIEIKKSEEKTAKKSQSD ILSKEQKSEIKQSFADRLSKYITKLKVNVDISKIKSPLDYKKIYEVGGAAEDARAVLGYYLAIYEQVADSCEEALPPLVI DTPNQQEQARGIIPTL >Mature_496_residues MKKLILKKIMILSDSGKSARQFEFGEHLTLITADDDNSVGKSTLAKMIFWTFGCEPIFSEVWRTLDCTSIIEFEINNAPY IIHRYKNEIKIRHSNGKLHSFPKITGDYSKYFSELVNFNVLLPKKGQLTLETPPPAYYFIPFYIDQKRTWAKPWDSFENL QQYSSWAKPVISYHSGLFIKAHFEVEKDIYVIKRELEEVEKGVTELNNAVIILRQNLIDTDNVLPSTEFIFSVIQESEKN KKNLLEERTNLRVEKIRLESQIKLAKGIISELDKDYIFSVENMEDGDIECPTCGTIHENSIAHRTSILIDMELAKNQLES LESEVNGIINLLVIKDEEITEQSNKSERSYNNVIESDSNSLISFTNDKFEKRAHEINSKKNITIEIKKSEEKTAKKSQSD ILSKEQKSEIKQSFADRLSKYITKLKVNVDISKIKSPLDYKKIYEVGGAAEDARAVLGYYLAIYEQVADSCEEALPPLVI DTPNQQEQARGIIPTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56979; Mature: 56979
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLILKKIMILSDSGKSARQFEFGEHLTLITADDDNSVGKSTLAKMIFWTFGCEPIFSE CHHHHHHHHHHCCCCCCCCCCEECCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHH VWRTLDCTSIIEFEINNAPYIIHRYKNEIKIRHSNGKLHSFPKITGDYSKYFSELVNFNV HHHHCCCCEEEEEEECCCCEEEEEECCEEEEEECCCCEECCCCCCCHHHHHHHHHHCCEE LLPKKGQLTLETPPPAYYFIPFYIDQKRTWAKPWDSFENLQQYSSWAKPVISYHSGLFIK EECCCCCEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEE AHFEVEKDIYVIKRELEEVEKGVTELNNAVIILRQNLIDTDNVLPSTEFIFSVIQESEKN EEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCH KKNLLEERTNLRVEKIRLESQIKLAKGIISELDKDYIFSVENMEDGDIECPTCGTIHENS HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCC IAHRTSILIDMELAKNQLESLESEVNGIINLLVIKDEEITEQSNKSERSYNNVIESDSNS HHHHHEEEEEHHHHHHHHHHHHHHHHCEEEEEEECCHHHHHHCCCHHHHHHHHHHCCCCC LISFTNDKFEKRAHEINSKKNITIEIKKSEEKTAKKSQSDILSKEQKSEIKQSFADRLSK EEEECCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YITKLKVNVDISKIKSPLDYKKIYEVGGAAEDARAVLGYYLAIYEQVADSCEEALPPLVI HHHHHEEEEEHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE DTPNQQEQARGIIPTL ECCCHHHHHCCCCCCC >Mature Secondary Structure MKKLILKKIMILSDSGKSARQFEFGEHLTLITADDDNSVGKSTLAKMIFWTFGCEPIFSE CHHHHHHHHHHCCCCCCCCCCEECCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHH VWRTLDCTSIIEFEINNAPYIIHRYKNEIKIRHSNGKLHSFPKITGDYSKYFSELVNFNV HHHHCCCCEEEEEEECCCCEEEEEECCEEEEEECCCCEECCCCCCCHHHHHHHHHHCCEE LLPKKGQLTLETPPPAYYFIPFYIDQKRTWAKPWDSFENLQQYSSWAKPVISYHSGLFIK EECCCCCEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEE AHFEVEKDIYVIKRELEEVEKGVTELNNAVIILRQNLIDTDNVLPSTEFIFSVIQESEKN EEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCH KKNLLEERTNLRVEKIRLESQIKLAKGIISELDKDYIFSVENMEDGDIECPTCGTIHENS HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCC IAHRTSILIDMELAKNQLESLESEVNGIINLLVIKDEEITEQSNKSERSYNNVIESDSNS HHHHHEEEEEHHHHHHHHHHHHHHHHCEEEEEEECCHHHHHHCCCHHHHHHHHHHCCCCC LISFTNDKFEKRAHEINSKKNITIEIKKSEEKTAKKSQSDILSKEQKSEIKQSFADRLSK EEEECCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YITKLKVNVDISKIKSPLDYKKIYEVGGAAEDARAVLGYYLAIYEQVADSCEEALPPLVI HHHHHEEEEEHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE DTPNQQEQARGIIPTL ECCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA