Click here to switch to the map view.

The map label for this gene is ygbK [C]

Identifier: 22126829

GI number: 22126829

Start: 3251814

End: 3253127

Strand: Reverse

Name: ygbK [C]

Synonym: y2952

Alternate gene names: 22126829

Gene position: 3253127-3251814 (Counterclockwise)

Preceding gene: 22126830

Following gene: 22126828

Centisome position: 70.71

GC content: 51.37

Gene sequence:

>1314_bases
GTGGCTGAGATGTCTATTCAACTTGGCGTGATTGCAGATGACTTTACCGGGGCGACTGACATTGCAAGTTTTATGTCAGA
CAGCGGCTGGAAAGTGGTGCAGTTTATTGAGGTTCCCACGTCAAATAATCTGTGCCCTCCTAATACCGATGCTGTCGTGA
TTGCGTTGAAGAGCCGCTCAATTCCCGCCGCTGAGGCTATTGAACAATCATTGGCCTGCCTACAGTGGCTAAAAGAGTGC
GCACAAGCTCGGCAAATCTATTTCAAATATTGTTCCACGTTTGATTCAACGCCCGCAGGCAATATCGGTCAGGTCAGCGA
TGCCTTGATGTCTGCCGCGGGGGTGCAACAGTTAGTTCACTGTCCTGCATTGCCGCAGAATAAGCGCACTGTGGTTCATG
CCCATCTTTTCGTCAATGGCGTGTTGCTGAATCAATCAGGGATGGAAAATCACCCGCTCAACCCGATGCGTGATGCTGAT
CTACGGCGGGTACTGGCGCCACAAATTCATGGCGCGGTGGGTTCATTGAATCTCGACGCTATTCAACAGGGTACATTGGC
TATTCATCAGCGTCTGGTTGCGCTATCAGCACAGGGCTGCAACCACGTGATTGCTGATACGCTCACCCCAGCTGATTTGG
ATCAGCTGGCACTGGCGTTAGCCCAGCAACCATTACTTGCGGGCGGTTCGGGTTTAGGGGGGGCGTTGGCGAAACGGTTT
CCTTCTATTTTTATTTCAGGTGCGGCTTCTACGTTAGATGCGGCTTCTACGTCAGGGGCGACGAAATTTGCGTTTCCGAT
TAAGCGGAAAACCGTGGTGCTGTCAGGCAGTTGTTCAGCCATGACTCAGCAGCAAGTTAGCACTTACTGTCAACAGGCGG
CACATTTTGCGCTGGATGTTGGGCGTTGTCTTGAGGTGAATTCAGGTTATATCAATGATATTGCTGATTGGGTGATGGCA
CATAGCTGCGAGGCGCTGGCGCCATTGGTGTACGCCACTCAGCCGTCGGATATCATTCGTGAAATCCAACAACAATACGG
GGAGCAGCAAGCCAGTCTGGCCGTGGAAGCCGCGTTTGCTGGTTTGGCTAACGAATTATTAGCCCGTGGTGTCAATACGT
TCATCGTGGCAGGTGGTGAAACATCCGGTACGGTGGTGAAACAACTTGGCGTTAATATGTTGGAAATTGGCCAATCAATC
GCACCTGGGGTTCCGTGGGTACGTGACCCTCAGCGTGGTCTGATGCTGGCACTCAAGTCCGGTAATTTTGGTAATGAACA
CTTTTTTGTGGCAGCACAGGAGTATACAGAGTGA

Upstream 100 bases:

>100_bases
GAATTTTCATAAATTCATTATTTTAAAATTTGTGATAACAGTCATCTCAATGTGAAGCCCAAAGCTTAACAATAGTGTCA
ATTCAAACGGTTTCACAGGA

Downstream 100 bases:

>100_bases
ACAGCCCCCCGTTTTCAGAGCCGCCACCATCTTTGGAGCCGCCACCAGCGTCAAAACTGTCACCACCTGCCAAACAAGTA
CCCTTTTCGGAGCAACAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MAEMSIQLGVIADDFTGATDIASFMSDSGWKVVQFIEVPTSNNLCPPNTDAVVIALKSRSIPAAEAIEQSLACLQWLKEC
AQARQIYFKYCSTFDSTPAGNIGQVSDALMSAAGVQQLVHCPALPQNKRTVVHAHLFVNGVLLNQSGMENHPLNPMRDAD
LRRVLAPQIHGAVGSLNLDAIQQGTLAIHQRLVALSAQGCNHVIADTLTPADLDQLALALAQQPLLAGGSGLGGALAKRF
PSIFISGAASTLDAASTSGATKFAFPIKRKTVVLSGSCSAMTQQQVSTYCQQAAHFALDVGRCLEVNSGYINDIADWVMA
HSCEALAPLVYATQPSDIIREIQQQYGEQQASLAVEAAFAGLANELLARGVNTFIVAGGETSGTVVKQLGVNMLEIGQSI
APGVPWVRDPQRGLMLALKSGNFGNEHFFVAAQEYTE

Sequences:

>Translated_437_residues
MAEMSIQLGVIADDFTGATDIASFMSDSGWKVVQFIEVPTSNNLCPPNTDAVVIALKSRSIPAAEAIEQSLACLQWLKEC
AQARQIYFKYCSTFDSTPAGNIGQVSDALMSAAGVQQLVHCPALPQNKRTVVHAHLFVNGVLLNQSGMENHPLNPMRDAD
LRRVLAPQIHGAVGSLNLDAIQQGTLAIHQRLVALSAQGCNHVIADTLTPADLDQLALALAQQPLLAGGSGLGGALAKRF
PSIFISGAASTLDAASTSGATKFAFPIKRKTVVLSGSCSAMTQQQVSTYCQQAAHFALDVGRCLEVNSGYINDIADWVMA
HSCEALAPLVYATQPSDIIREIQQQYGEQQASLAVEAAFAGLANELLARGVNTFIVAGGETSGTVVKQLGVNMLEIGQSI
APGVPWVRDPQRGLMLALKSGNFGNEHFFVAAQEYTE
>Mature_436_residues
AEMSIQLGVIADDFTGATDIASFMSDSGWKVVQFIEVPTSNNLCPPNTDAVVIALKSRSIPAAEAIEQSLACLQWLKECA
QARQIYFKYCSTFDSTPAGNIGQVSDALMSAAGVQQLVHCPALPQNKRTVVHAHLFVNGVLLNQSGMENHPLNPMRDADL
RRVLAPQIHGAVGSLNLDAIQQGTLAIHQRLVALSAQGCNHVIADTLTPADLDQLALALAQQPLLAGGSGLGGALAKRFP
SIFISGAASTLDAASTSGATKFAFPIKRKTVVLSGSCSAMTQQQVSTYCQQAAHFALDVGRCLEVNSGYINDIADWVMAH
SCEALAPLVYATQPSDIIREIQQQYGEQQASLAVEAAFAGLANELLARGVNTFIVAGGETSGTVVKQLGVNMLEIGQSIA
PGVPWVRDPQRGLMLALKSGNFGNEHFFVAAQEYTE

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=399, Percent_Identity=46.6165413533835, Blast_Score=322, Evalue=2e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 46289; Mature: 46158

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEMSIQLGVIADDFTGATDIASFMSDSGWKVVQFIEVPTSNNLCPPNTDAVVIALKSRS
CCCCEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCC
IPAAEAIEQSLACLQWLKECAQARQIYFKYCSTFDSTPAGNIGQVSDALMSAAGVQQLVH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
CPALPQNKRTVVHAHLFVNGVLLNQSGMENHPLNPMRDADLRRVLAPQIHGAVGSLNLDA
CCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHH
IQQGTLAIHQRLVALSAQGCNHVIADTLTPADLDQLALALAQQPLLAGGSGLGGALAKRF
HHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHC
PSIFISGAASTLDAASTSGATKFAFPIKRKTVVLSGSCSAMTQQQVSTYCQQAAHFALDV
CHHEEECCCHHHHHHCCCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
GRCLEVNSGYINDIADWVMAHSCEALAPLVYATQPSDIIREIQQQYGEQQASLAVEAAFA
HHHEECCCCCHHHHHHHHHHHCHHHHHCEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHH
GLANELLARGVNTFIVAGGETSGTVVKQLGVNMLEIGQSIAPGVPWVRDPQRGLMLALKS
HHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCHHHHCHHHCCCCCCCCCCCCCEEEEEEC
GNFGNEHFFVAAQEYTE
CCCCCCEEEEEECCCCC
>Mature Secondary Structure 
AEMSIQLGVIADDFTGATDIASFMSDSGWKVVQFIEVPTSNNLCPPNTDAVVIALKSRS
CCCEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCC
IPAAEAIEQSLACLQWLKECAQARQIYFKYCSTFDSTPAGNIGQVSDALMSAAGVQQLVH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
CPALPQNKRTVVHAHLFVNGVLLNQSGMENHPLNPMRDADLRRVLAPQIHGAVGSLNLDA
CCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHH
IQQGTLAIHQRLVALSAQGCNHVIADTLTPADLDQLALALAQQPLLAGGSGLGGALAKRF
HHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHC
PSIFISGAASTLDAASTSGATKFAFPIKRKTVVLSGSCSAMTQQQVSTYCQQAAHFALDV
CHHEEECCCHHHHHHCCCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
GRCLEVNSGYINDIADWVMAHSCEALAPLVYATQPSDIIREIQQQYGEQQASLAVEAAFA
HHHEECCCCCHHHHHHHHHHHCHHHHHCEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHH
GLANELLARGVNTFIVAGGETSGTVVKQLGVNMLEIGQSIAPGVPWVRDPQRGLMLALKS
HHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCHHHHCHHHCCCCCCCCCCCCCEEEEEEC
GNFGNEHFFVAAQEYTE
CCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]