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The map label for this gene is ymfQ [H]

Identifier: 22126812

GI number: 22126812

Start: 3238400

End: 3238774

Strand: Reverse

Name: ymfQ [H]

Synonym: y2935

Alternate gene names: 22126812

Gene position: 3238774-3238400 (Counterclockwise)

Preceding gene: 22126813

Following gene: 22126811

Centisome position: 70.4

GC content: 52.53

Gene sequence:

>375_bases
GTGTGCGCGATTGGTGAGATCGATAGCATGATCCAACGCCAGCGGGCGGTGGTCGCCAAATTGTTTGGTATTGGCGGCCA
ATCGGCGGCGTACTTTATCCGCGTGGCAAAGGCTCTGGGCTATGACATTACCGTTACCCAATACCGGCAAGCCTGCGCGG
GTATGTCGGTGTGCCGTGATGCATTGAACGGTGAAGAGTGGCCTTTTACCTGGCTAATTACCGCACCGGAAACCACCATT
CATAATGCCCAATGCAGCTTAACGTATTGCAGTGATCCGCTGCGTTCGTGGGGCAATAAACAGCTTGAATGCCGGTTAGC
GGTATTAAACCCGTCCCATTCTATTCTGAAGTTTGGCTATACCCTGCTTAGTTGA

Upstream 100 bases:

>100_bases
GCAGCGATGAAGATGCACAAGATCTGCTGTCGGCGGCTTTCCCGGCCACCGCCACGGCTCTCTTACCTGAATGGGAAGCG
ACACTGGGCTTGCCCGATTT

Downstream 100 bases:

>100_bases
TATTTCAGTGTGTCTATCTGGCGGCCACGCCAAGTACTTCGGGTCATTATTCATTAACCATTTCTATTTTATCGCTTTAA
CCAGTGAGGTATTACCATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MCAIGEIDSMIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDITVTQYRQACAGMSVCRDALNGEEWPFTWLITAPETTI
HNAQCSLTYCSDPLRSWGNKQLECRLAVLNPSHSILKFGYTLLS

Sequences:

>Translated_124_residues
MCAIGEIDSMIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDITVTQYRQACAGMSVCRDALNGEEWPFTWLITAPETTI
HNAQCSLTYCSDPLRSWGNKQLECRLAVLNPSHSILKFGYTLLS
>Mature_124_residues
MCAIGEIDSMIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDITVTQYRQACAGMSVCRDALNGEEWPFTWLITAPETTI
HNAQCSLTYCSDPLRSWGNKQLECRLAVLNPSHSILKFGYTLLS

Specific function: Unknown

COG id: COG3778

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein gp48 and H.influenzae HI_1521 [H]

Homologues:

Organism=Escherichia coli, GI1787399, Length=121, Percent_Identity=33.0578512396694, Blast_Score=66, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018755 [H]

Pfam domain/function: PF10076 DUF2313 [H]

EC number: NA

Molecular weight: Translated: 13723; Mature: 13723

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCAIGEIDSMIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDITVTQYRQACAGMSVCRD
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ALNGEEWPFTWLITAPETTIHNAQCSLTYCSDPLRSWGNKQLECRLAVLNPSHSILKFGY
HCCCCCCCEEEEEECCCCEECCCEEEEEECCCHHHHHCCCEEEEEEEEECCCHHHHHHHH
TLLS
HHCC
>Mature Secondary Structure
MCAIGEIDSMIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDITVTQYRQACAGMSVCRD
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ALNGEEWPFTWLITAPETTIHNAQCSLTYCSDPLRSWGNKQLECRLAVLNPSHSILKFGY
HCCCCCCCEEEEEECCCCEECCCEEEEEECCCHHHHHCCCEEEEEEEEECCCHHHHHHHH
TLLS
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]