| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is yeiR [H]
Identifier: 22126783
GI number: 22126783
Start: 3210264
End: 3211247
Strand: Direct
Name: yeiR [H]
Synonym: y2906
Alternate gene names: 22126783
Gene position: 3210264-3211247 (Clockwise)
Preceding gene: 22126780
Following gene: 22126784
Centisome position: 69.78
GC content: 48.27
Gene sequence:
>984_bases ATGACAAAGACCAATTTAATTACCGGATTTTTAGGTTGTGGCAAAACCACAACTATCCGGCACTTACTCGCACAGAAGCC GGAACATGAAAAATGGGCGGTGCTGGTCAATGAATTTGGTGAGATTGGTATTGATGGCGCTCTGTTGGCGGATAGCGGTG CTGTTTTAAAAGAGATCCCAGGGGGCTGTATGTGCTGTGTTAATGGGCTACCGATGCAAATTGGCCTGAACATGCTGTTG CAGCAGGCAAAACCAGATCGCCTGCTCATTGAGCCAACCGGGCTGGGCCACCCGAAACAAATTCTGTCATTATTAACGTC TGATATTTATCAGCCTTGGATTGACTTACGCGCCACACTTTGTCTGCTGGATGCCCGCCAACTGAGTGAACCCCGTTATA CCGAAAATGAAAATTTCCGTGACCAACTGGCGGCGGCAGATATCATTGTGGTCAACAAGCAAGACACTTACCGCTCGGCC GATAACGCGGTGTTACAACAATGGCAACAAAAGCAGCCATTATCGCGGCCGCTGTATCATAGCGAATATGGCAAACTCGA CGTGGCCCTGCTCGACCAACCACACAGTAATAAAGACGAACTTCCTTCTGGTACACATCATCACGGCACATCACAGCCAA AAGGATTAGCCGCATTACGTCTGAAAGGGGCCGAACCCTGGCGTCGGGCATTAAATCGGGGGCAAGGGTATCTGAGCTGT GGCTGGGTATTTGATGCCAACACCGTTTTTGATACCGTGCCATTATTGGAGTGGGTACGATTGAACCCAGCAGAACGGGT AAAAGGTGTCATGCGCATCCCGGAAGGAACCTTGATGGTTAATCGACAAGGTAATGACTTACAAATAGACACTCGCCAAA TACCCCCGCTGGATAGCCGCATTGAATTGATTAGCGCCACTGATATTGATTGGAACGTATTGCAACATGATTTATTAAAA ATTCGTTTACGTAACGGGGTATGA
Upstream 100 bases:
>100_bases AAGCCTAATTGGCCTTATTTCCTTTCAGGTTGAAAGGGTAATAAATAGCCATATAATTTGTAAATCATATAAAAATATTT TTGTATTTTGGAGATCCAGC
Downstream 100 bases:
>100_bases TGTCTCCCCATTTTTATTTTCTTTCCGTTGTGTACATTTTTAATTTATAGGTTACCGCATGACTCGTCGTAATTTACCGA CAATATTGCTCCTCAATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTKTNLITGFLGCGKTTTIRHLLAQKPEHEKWAVLVNEFGEIGIDGALLADSGAVLKEIPGGCMCCVNGLPMQIGLNMLL QQAKPDRLLIEPTGLGHPKQILSLLTSDIYQPWIDLRATLCLLDARQLSEPRYTENENFRDQLAAADIIVVNKQDTYRSA DNAVLQQWQQKQPLSRPLYHSEYGKLDVALLDQPHSNKDELPSGTHHHGTSQPKGLAALRLKGAEPWRRALNRGQGYLSC GWVFDANTVFDTVPLLEWVRLNPAERVKGVMRIPEGTLMVNRQGNDLQIDTRQIPPLDSRIELISATDIDWNVLQHDLLK IRLRNGV
Sequences:
>Translated_327_residues MTKTNLITGFLGCGKTTTIRHLLAQKPEHEKWAVLVNEFGEIGIDGALLADSGAVLKEIPGGCMCCVNGLPMQIGLNMLL QQAKPDRLLIEPTGLGHPKQILSLLTSDIYQPWIDLRATLCLLDARQLSEPRYTENENFRDQLAAADIIVVNKQDTYRSA DNAVLQQWQQKQPLSRPLYHSEYGKLDVALLDQPHSNKDELPSGTHHHGTSQPKGLAALRLKGAEPWRRALNRGQGYLSC GWVFDANTVFDTVPLLEWVRLNPAERVKGVMRIPEGTLMVNRQGNDLQIDTRQIPPLDSRIELISATDIDWNVLQHDLLK IRLRNGV >Mature_326_residues TKTNLITGFLGCGKTTTIRHLLAQKPEHEKWAVLVNEFGEIGIDGALLADSGAVLKEIPGGCMCCVNGLPMQIGLNMLLQ QAKPDRLLIEPTGLGHPKQILSLLTSDIYQPWIDLRATLCLLDARQLSEPRYTENENFRDQLAAADIIVVNKQDTYRSAD NAVLQQWQQKQPLSRPLYHSEYGKLDVALLDQPHSNKDELPSGTHHHGTSQPKGLAALRLKGAEPWRRALNRGQGYLSCG WVFDANTVFDTVPLLEWVRLNPAERVKGVMRIPEGTLMVNRQGNDLQIDTRQIPPLDSRIELISATDIDWNVLQHDLLKI RLRNGV
Specific function: Unknown
COG id: COG0523
COG function: function code R; Putative GTPases (G3E family)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cobW C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI126722884, Length=169, Percent_Identity=33.7278106508876, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI223941779, Length=169, Percent_Identity=33.7278106508876, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI33469141, Length=174, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI148727351, Length=174, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI146231952, Length=174, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1788499, Length=324, Percent_Identity=67.2839506172839, Blast_Score=442, Evalue=1e-125, Organism=Escherichia coli, GI87082430, Length=194, Percent_Identity=30.9278350515464, Blast_Score=82, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003495 - InterPro: IPR011629 [H]
Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]
EC number: NA
Molecular weight: Translated: 36593; Mature: 36461
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTNLITGFLGCGKTTTIRHLLAQKPEHEKWAVLVNEFGEIGIDGALLADSGAVLKEIP CCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHCC GGCMCCVNGLPMQIGLNMLLQQAKPDRLLIEPTGLGHPKQILSLLTSDIYQPWIDLRATL CCEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH CLLDARQLSEPRYTENENFRDQLAAADIIVVNKQDTYRSADNAVLQQWQQKQPLSRPLYH HHHHHHHCCCCCCCCCCCHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCC SEYGKLDVALLDQPHSNKDELPSGTHHHGTSQPKGLAALRLKGAEPWRRALNRGQGYLSC CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCEEEE GWVFDANTVFDTVPLLEWVRLNPAERVKGVMRIPEGTLMVNRQGNDLQIDTRQIPPLDSR EEEEECCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCC IELISATDIDWNVLQHDLLKIRLRNGV EEEEEECCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure TKTNLITGFLGCGKTTTIRHLLAQKPEHEKWAVLVNEFGEIGIDGALLADSGAVLKEIP CCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHCC GGCMCCVNGLPMQIGLNMLLQQAKPDRLLIEPTGLGHPKQILSLLTSDIYQPWIDLRATL CCEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH CLLDARQLSEPRYTENENFRDQLAAADIIVVNKQDTYRSADNAVLQQWQQKQPLSRPLYH HHHHHHHCCCCCCCCCCCHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCC SEYGKLDVALLDQPHSNKDELPSGTHHHGTSQPKGLAALRLKGAEPWRRALNRGQGYLSC CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCEEEE GWVFDANTVFDTVPLLEWVRLNPAERVKGVMRIPEGTLMVNRQGNDLQIDTRQIPPLDSR EEEEECCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCC IELISATDIDWNVLQHDLLKIRLRNGV EEEEEECCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]