Definition Yersinia pestis KIM 10 chromosome, complete genome.
Accession NC_004088
Length 4,600,755

Click here to switch to the map view.

The map label for this gene is 22126775

Identifier: 22126775

GI number: 22126775

Start: 3202539

End: 3202913

Strand: Direct

Name: 22126775

Synonym: y2899

Alternate gene names: NA

Gene position: 3202539-3202913 (Clockwise)

Preceding gene: 22126774

Following gene: 22126777

Centisome position: 69.61

GC content: 53.87

Gene sequence:

>375_bases
ATGCGGGATATACCAGCATCTGAGGGCGGTCAGGAGAAGCAGAGGAACACGTACTGGCAGCGGAGAGAATCAGCCGATCG
TAAAAGCGCATTTAAGGCGCAGTCACCGCTTCCAGCGCAATCAAATACACCAACGCCTCTTCACGGGTGTGATGACACAT
TTCCCGCATTGCTTGCAAGCTGGCACATACCGCAGGGCGCAATGGCGAGTAAAAAATGCCACAACGCATGTTGTCATCCA
AGTGTACACACCGGGTATTGGCGGGTTTGCCCAATGGCATACCGGGGATCGGGCTGGAAATCGAAGGTGCAATACAGCAG
GCTCCGCAATCTGAGCGACAGTCCATCGGCAGGCTCCTGTGAGCAAGTAAAATAA

Upstream 100 bases:

>100_bases
CCCATGGGGCGGTTAGGCAGCCCCCATGAAATTGCTTCTGTGGTGCAGTTTTTGGCTTCGGAGGCCTCCAGCTTGCTGAC
AGGTTCAATCATTACTGCCG

Downstream 100 bases:

>100_bases
GAACAAAGAGAGTAATAACCGGTGAATAAGGCCGGACAATAGCAACCGCACGCCTAAACTACCAGCACTCTCCTCCCGCC
CTCATCAAACAACGCATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MRDIPASEGGQEKQRNTYWQRRESADRKSAFKAQSPLPAQSNTPTPLHGCDDTFPALLASWHIPQGAMASKKCHNACCHP
SVHTGYWRVCPMAYRGSGWKSKVQYSRLRNLSDSPSAGSCEQVK

Sequences:

>Translated_124_residues
MRDIPASEGGQEKQRNTYWQRRESADRKSAFKAQSPLPAQSNTPTPLHGCDDTFPALLASWHIPQGAMASKKCHNACCHP
SVHTGYWRVCPMAYRGSGWKSKVQYSRLRNLSDSPSAGSCEQVK
>Mature_124_residues
MRDIPASEGGQEKQRNTYWQRRESADRKSAFKAQSPLPAQSNTPTPLHGCDDTFPALLASWHIPQGAMASKKCHNACCHP
SVHTGYWRVCPMAYRGSGWKSKVQYSRLRNLSDSPSAGSCEQVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13807; Mature: 13807

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDIPASEGGQEKQRNTYWQRRESADRKSAFKAQSPLPAQSNTPTPLHGCDDTFPALLAS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
WHIPQGAMASKKCHNACCHPSVHTGYWRVCPMAYRGSGWKSKVQYSRLRNLSDSPSAGSC
CCCCCCCHHHHHHHHHCCCCCCCCCEEEECCHHHCCCCCHHHHHHHHHHCCCCCCCCCCC
EQVK
CCCC
>Mature Secondary Structure
MRDIPASEGGQEKQRNTYWQRRESADRKSAFKAQSPLPAQSNTPTPLHGCDDTFPALLAS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
WHIPQGAMASKKCHNACCHPSVHTGYWRVCPMAYRGSGWKSKVQYSRLRNLSDSPSAGSC
CCCCCCCHHHHHHHHHCCCCCCCCCEEEECCHHHCCCCCHHHHHHHHHHCCCCCCCCCCC
EQVK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA