| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is fhuB [C]
Identifier: 22126716
GI number: 22126716
Start: 3140667
End: 3141059
Strand: Reverse
Name: fhuB [C]
Synonym: y2838
Alternate gene names: 22126716
Gene position: 3141059-3140667 (Counterclockwise)
Preceding gene: 22126717
Following gene: 22126715
Centisome position: 68.27
GC content: 52.93
Gene sequence:
>393_bases TTGCCGATGACGTTAACCGCCGTGGTGGTGGGCGCGAGTTTGGGTTTGGCTGGCTTGTTGATGCAAACCGTACTGGCGAA TCCGTTAGCCAGTCCTTATACCTTGGGGATTTCAGCCGCGGCAGGATTTGGTGCCGCATTATCGATCATCACTGGCTTCA GCGTGGGGGGAGTCTTGTCATTAGGCACCCCATTATTGGCTTCACTGATGGCATTACTGGCCTGCCTGCCCATTTACTTT CTGGGCCAACGGCAGGGGATGACACCGCAAATTCTGGTGTTGAGCGGCATTGTGGTGCTGTTCTTCTTCCAGTCGTTGCA ATCACTCATGTTATTTCGGCCTCACCAGAAGCGATGCAACAAATTGTATTCTGGCTGTTTGGCAGCCTGCTAA
Upstream 100 bases:
>100_bases CTGGCGCGGCCAACCTTAGCCCACTTGATGTATTGCGACTGTTTCTGGTGGATTCTTCGCAGCATGATGAACTACACCAG ATCATTTTTGGTCCATTCGT
Downstream 100 bases:
>100_bases AAGCCAATATGCAGGGGGTGCTAATGACGGGCAGCGTACTGGCTTGTTCACTGGTTATCTGTTTGCAGCAGGCATGGCGA TTGACCGCGCTTTCAGCGGG
Product: hypothetical protein
Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MPMTLTAVVVGASLGLAGLLMQTVLANPLASPYTLGISAAAGFGAALSIITGFSVGGVLSLGTPLLASLMALLACLPIYF LGQRQGMTPQILVLSGIVVLFFFQSLQSLMLFRPHQKRCNKLYSGCLAAC
Sequences:
>Translated_130_residues MPMTLTAVVVGASLGLAGLLMQTVLANPLASPYTLGISAAAGFGAALSIITGFSVGGVLSLGTPLLASLMALLACLPIYF LGQRQGMTPQILVLSGIVVLFFFQSLQSLMLFRPHQKRCNKLYSGCLAAC >Mature_129_residues PMTLTAVVVGASLGLAGLLMQTVLANPLASPYTLGISAAAGFGAALSIITGFSVGGVLSLGTPLLASLMALLACLPIYFL GQRQGMTPQILVLSGIVVLFFFQSLQSLMLFRPHQKRCNKLYSGCLAAC
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 13449; Mature: 13317
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMTLTAVVVGASLGLAGLLMQTVLANPLASPYTLGISAAAGFGAALSIITGFSVGGVLS CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHH LGTPLLASLMALLACLPIYFLGQRQGMTPQILVLSGIVVLFFFQSLQSLMLFRPHQKRCN HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH KLYSGCLAAC HHHHHHHHCC >Mature Secondary Structure PMTLTAVVVGASLGLAGLLMQTVLANPLASPYTLGISAAAGFGAALSIITGFSVGGVLS CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHH LGTPLLASLMALLACLPIYFLGQRQGMTPQILVLSGIVVLFFFQSLQSLMLFRPHQKRCN HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH KLYSGCLAAC HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]
Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]