| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126711
Identifier: 22126711
GI number: 22126711
Start: 3136458
End: 3137318
Strand: Reverse
Name: 22126711
Synonym: y2834
Alternate gene names: NA
Gene position: 3137318-3136458 (Counterclockwise)
Preceding gene: 22126712
Following gene: 22126704
Centisome position: 68.19
GC content: 49.01
Gene sequence:
>861_bases ATGGCGGAGCCAGACATGAACCAAGGCGCGTTATTGGCTATTCTCGCCTCCCTGATTTTCAGCGTGATGAATGTGTTAGT CAAAACCATCGCTGATGAAATTCCTACCGGTGAGATCGTATTCTTCCGCAGTAGCATTGGTTGCTTGTTGATTGGGTTAC TGATGTATCAGCGTGGGATAGCGTTCAGCCGTGAAGATCGCCCATTGTTGGTACTCCGGGGGACGATGGGCGCACTGTAT CTGATTTGCTATTTTTACAGTATTGCTCACCTGACATTGGCAGATGCCAGCATGTTGGCCTATCTGTCACCGTTTTTCTC GATTGTGCTGTCATTATTAGTGTTGCGCGAACGGGTGAATGCCACCATGGCTTTCTGGTTGGTGATGGTGATTATTGGCG CGATTATCTTGATCCGCCCGTGGAATTTTTCCACCTATACGTTGGCGTCTCTGGTGGGGGTGATGAGTGCGGTATTTGCG GCTATTGCTTATTTGTCGGTGAATAAGCTCACGAAGCGCCATCACAATTATGAAATCGTCTTCTACTTTTTGTTTATCGC GACGCTGATCTCTATCCCACTGATGTGGCATAACTTTGTTTGGCCGAGTGGGTATCAGTTCGGCATTCTCATCGCCATTG CTCTTGTCTCATTGCTAGGTCAGGTGGTTTTAACGCAGGCTTTCTCTTCGGACAACCTGATCGTGGTGTCGGTGGTGCGC TATATCGGCATTGTCTTCAATATTACCTGGGGCTGGCTATTTTGGGATGAGGTGCCATTGATGTTGTCGTTGATGGGGGG CGGGTTGGTGGTGGTATCGTGCATTCAGTTGGGGTTACGCAGTAAAAAGAAGGCGGCCTGA
Upstream 100 bases:
>100_bases AGGCGCTCAAGGCGTTTATTGACCGGGTCGGTGAGGAACATTGCCATCCCTCTTTATTGGGGGACGATTGTGACAGGCAG GCGGCCATCATCGAACAACA
Downstream 100 bases:
>100_bases TATTCACACAAGGCAAACTGATCGTTATACCCCAAATAATTCGAGTGGCAGGAAGGCAGCCAACGCATAGGCAGCTTGAA GCATGACGGTTAGATAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MAEPDMNQGALLAILASLIFSVMNVLVKTIADEIPTGEIVFFRSSIGCLLIGLLMYQRGIAFSREDRPLLVLRGTMGALY LICYFYSIAHLTLADASMLAYLSPFFSIVLSLLVLRERVNATMAFWLVMVIIGAIILIRPWNFSTYTLASLVGVMSAVFA AIAYLSVNKLTKRHHNYEIVFYFLFIATLISIPLMWHNFVWPSGYQFGILIAIALVSLLGQVVLTQAFSSDNLIVVSVVR YIGIVFNITWGWLFWDEVPLMLSLMGGGLVVVSCIQLGLRSKKKAA
Sequences:
>Translated_286_residues MAEPDMNQGALLAILASLIFSVMNVLVKTIADEIPTGEIVFFRSSIGCLLIGLLMYQRGIAFSREDRPLLVLRGTMGALY LICYFYSIAHLTLADASMLAYLSPFFSIVLSLLVLRERVNATMAFWLVMVIIGAIILIRPWNFSTYTLASLVGVMSAVFA AIAYLSVNKLTKRHHNYEIVFYFLFIATLISIPLMWHNFVWPSGYQFGILIAIALVSLLGQVVLTQAFSSDNLIVVSVVR YIGIVFNITWGWLFWDEVPLMLSLMGGGLVVVSCIQLGLRSKKKAA >Mature_285_residues AEPDMNQGALLAILASLIFSVMNVLVKTIADEIPTGEIVFFRSSIGCLLIGLLMYQRGIAFSREDRPLLVLRGTMGALYL ICYFYSIAHLTLADASMLAYLSPFFSIVLSLLVLRERVNATMAFWLVMVIIGAIILIRPWNFSTYTLASLVGVMSAVFAA IAYLSVNKLTKRHHNYEIVFYFLFIATLISIPLMWHNFVWPSGYQFGILIAIALVSLLGQVVLTQAFSSDNLIVVSVVRY IGIVFNITWGWLFWDEVPLMLSLMGGGLVVVSCIQLGLRSKKKAA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Homo sapiens, GI197927233, Length=303, Percent_Identity=24.7524752475248, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI23397492, Length=295, Percent_Identity=25.0847457627119, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24645940, Length=297, Percent_Identity=28.2828282828283, Blast_Score=95, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31808; Mature: 31677
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPDMNQGALLAILASLIFSVMNVLVKTIADEIPTGEIVFFRSSIGCLLIGLLMYQRGI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCC AFSREDRPLLVLRGTMGALYLICYFYSIAHLTLADASMLAYLSPFFSIVLSLLVLRERVN CCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATMAFWLVMVIIGAIILIRPWNFSTYTLASLVGVMSAVFAAIAYLSVNKLTKRHHNYEIV HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH FYFLFIATLISIPLMWHNFVWPSGYQFGILIAIALVSLLGQVVLTQAFSSDNLIVVSVVR HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH YIGIVFNITWGWLFWDEVPLMLSLMGGGLVVVSCIQLGLRSKKKAA HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AEPDMNQGALLAILASLIFSVMNVLVKTIADEIPTGEIVFFRSSIGCLLIGLLMYQRGI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCC AFSREDRPLLVLRGTMGALYLICYFYSIAHLTLADASMLAYLSPFFSIVLSLLVLRERVN CCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATMAFWLVMVIIGAIILIRPWNFSTYTLASLVGVMSAVFAAIAYLSVNKLTKRHHNYEIV HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH FYFLFIATLISIPLMWHNFVWPSGYQFGILIAIALVSLLGQVVLTQAFSSDNLIVVSVVR HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH YIGIVFNITWGWLFWDEVPLMLSLMGGGLVVVSCIQLGLRSKKKAA HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]