| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is pncB [H]
Identifier: 22126635
GI number: 22126635
Start: 3044056
End: 3045306
Strand: Direct
Name: pncB [H]
Synonym: y2757
Alternate gene names: 22126635
Gene position: 3044056-3045306 (Clockwise)
Preceding gene: 22126633
Following gene: 22126636
Centisome position: 66.16
GC content: 47.48
Gene sequence:
>1251_bases TTGCCGACTGTGGAAAATGCTCCTACGAGGATGCTGTATAGCGCCATGACTCAAGACGCCTCACCGATTTTGACTTCATT GCTTGATACGGACGCATATAAGCTTCATATGCAACAAGCCGTATTTCATCATTATCGTCACATTACTGTTGCCGCCGAAT TCCGCTGCCGTAGTGATGAGCTGCTGGGGGTGTATGCTGATGAAATCCGCCACCAGGTAACCCTGATGGGTCAATTAGCA CTGACATCTGATGAGTTTATTTACCTCTCCAGTCTCCCCTTCTTCCAGGATGATTATCTGCATTGGTTGCGCGATTTTCG TTTTAAACCAGAGCAAGTCTCCGTCGCTGTTCATGACGGTAAATTAGATATTCGCATTGCCGGTTTATGGTGTGAGGTGA TCATGTGGGAAGTGCCTTTGCTGGCAGTGATCAGCGAAATCGTTCACCGCCGCCGCTCTACCCAAGTGACAACGGATCAA GCGGTTCAACAACTGCGCACAAAACTTGAGCAATTCAATGCCCTCAGTGCGGATATCGATATTACTCACTTTAAATTGAT GGATTTCGGTACCCGCCGCCGATTCTCTCGCGAGATACAGCACACCGTTGTCAGCACGTTAAAAGATGAGTTCCCTTATC TGGTCGGCACCAGCAACTACGACTTAGCCCGCACATTAGCCTTAGCGCCCGTCGGGACTCAAGCCCATGAGTGGTTTCAG GCTCACCAACAAATTAGCCCAACATTGGCAAACAGCCAGCGTGTAGCACTGCAAGTCTGGCTGGATGAATACCCCAATCA ACTGGGCATCGCACTAACTGATTGCATTACTATGGATGCTTTCCTACGCGATTTTGATCTGGCTTTCGCCAACCGCTATC AAGGCCTACGCCATGACTCTGGTGACCCGATCGAGTGGGGGGAGAAGGCTATCGCGCATTATGAAAAATTGGGTATTGAC CCAATGAAAAAGGTATTGGTGTTTTCAGATAATCTAGATCTGGAGAAAGCATTATTCCTCTACCGTCACTTTTATCAGCG CATTAAGTTGGTGTTTGGTATCGGTACCCGTTTGACCTGCGATATACCAGATGTTAAGCCATTGAATATTGTTATTAAAC TGGTTGAATGTAACGATAAACCGGTGGCTAAGCTCTCAGATAGCCCGGGTAAGACTATTTGTCAGGACCCCGCATTCGTT GATCAATTACGTAAAGCCTTTGCGCTACCGTTAGTCAAGAAAGCCAGTTAA
Upstream 100 bases:
>100_bases GACGATGGCACATTAGTCTTAGACTTCTGATTAGCATTTATGGTGTGATGAGGCTTCAATAACATGATAATACCGGTATA CTCCTGCAACTTTATAGATT
Downstream 100 bases:
>100_bases TCCCCCCGTTGCCGGGTAGCGTATGTTTACCCGGTAACCCCAACACTGATATTTTTTAGCCTCTCTGTTCTTCCACAATT AAATTTTCTACTATTACTAC
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NAPRTase [H]
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MPTVENAPTRMLYSAMTQDASPILTSLLDTDAYKLHMQQAVFHHYRHITVAAEFRCRSDELLGVYADEIRHQVTLMGQLA LTSDEFIYLSSLPFFQDDYLHWLRDFRFKPEQVSVAVHDGKLDIRIAGLWCEVIMWEVPLLAVISEIVHRRRSTQVTTDQ AVQQLRTKLEQFNALSADIDITHFKLMDFGTRRRFSREIQHTVVSTLKDEFPYLVGTSNYDLARTLALAPVGTQAHEWFQ AHQQISPTLANSQRVALQVWLDEYPNQLGIALTDCITMDAFLRDFDLAFANRYQGLRHDSGDPIEWGEKAIAHYEKLGID PMKKVLVFSDNLDLEKALFLYRHFYQRIKLVFGIGTRLTCDIPDVKPLNIVIKLVECNDKPVAKLSDSPGKTICQDPAFV DQLRKAFALPLVKKAS
Sequences:
>Translated_416_residues MPTVENAPTRMLYSAMTQDASPILTSLLDTDAYKLHMQQAVFHHYRHITVAAEFRCRSDELLGVYADEIRHQVTLMGQLA LTSDEFIYLSSLPFFQDDYLHWLRDFRFKPEQVSVAVHDGKLDIRIAGLWCEVIMWEVPLLAVISEIVHRRRSTQVTTDQ AVQQLRTKLEQFNALSADIDITHFKLMDFGTRRRFSREIQHTVVSTLKDEFPYLVGTSNYDLARTLALAPVGTQAHEWFQ AHQQISPTLANSQRVALQVWLDEYPNQLGIALTDCITMDAFLRDFDLAFANRYQGLRHDSGDPIEWGEKAIAHYEKLGID PMKKVLVFSDNLDLEKALFLYRHFYQRIKLVFGIGTRLTCDIPDVKPLNIVIKLVECNDKPVAKLSDSPGKTICQDPAFV DQLRKAFALPLVKKAS >Mature_415_residues PTVENAPTRMLYSAMTQDASPILTSLLDTDAYKLHMQQAVFHHYRHITVAAEFRCRSDELLGVYADEIRHQVTLMGQLAL TSDEFIYLSSLPFFQDDYLHWLRDFRFKPEQVSVAVHDGKLDIRIAGLWCEVIMWEVPLLAVISEIVHRRRSTQVTTDQA VQQLRTKLEQFNALSADIDITHFKLMDFGTRRRFSREIQHTVVSTLKDEFPYLVGTSNYDLARTLALAPVGTQAHEWFQA HQQISPTLANSQRVALQVWLDEYPNQLGIALTDCITMDAFLRDFDLAFANRYQGLRHDSGDPIEWGEKAIAHYEKLGIDP MKKVLVFSDNLDLEKALFLYRHFYQRIKLVFGIGTRLTCDIPDVKPLNIVIKLVECNDKPVAKLSDSPGKTICQDPAFVD QLRKAFALPLVKKAS
Specific function: NAD biosynthesis; nicotinamide to NaMN; second step. [C]
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family [H]
Homologues:
Organism=Escherichia coli, GI1787162, Length=401, Percent_Identity=73.5660847880299, Blast_Score=613, Evalue=1e-177, Organism=Saccharomyces cerevisiae, GI6324783, Length=425, Percent_Identity=31.5294117647059, Blast_Score=200, Evalue=4e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006406 - InterPro: IPR015977 - InterPro: IPR007229 - InterPro: IPR002638 [H]
Pfam domain/function: PF04095 NAPRTase [H]
EC number: =2.4.2.11 [H]
Molecular weight: Translated: 47685; Mature: 47554
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTVENAPTRMLYSAMTQDASPILTSLLDTDAYKLHMQQAVFHHYRHITVAAEFRCRSDE CCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEEEEECCCCC LLGVYADEIRHQVTLMGQLALTSDEFIYLSSLPFFQDDYLHWLRDFRFKPEQVSVAVHDG HHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEECC KLDIRIAGLWCEVIMWEVPLLAVISEIVHRRRSTQVTTDQAVQQLRTKLEQFNALSADID EEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCE ITHFKLMDFGTRRRFSREIQHTVVSTLKDEFPYLVGTSNYDLARTLALAPVGTQAHEWFQ EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHEECCCCCHHHHHHH AHQQISPTLANSQRVALQVWLDEYPNQLGIALTDCITMDAFLRDFDLAFANRYQGLRHDS HHHHCCCHHCCCCEEEEEEEHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GDPIEWGEKAIAHYEKLGIDPMKKVLVFSDNLDLEKALFLYRHFYQRIKLVFGIGTRLTC CCCHHHHHHHHHHHHHHCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE DIPDVKPLNIVIKLVECNDKPVAKLSDSPGKTICQDPAFVDQLRKAFALPLVKKAS CCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure PTVENAPTRMLYSAMTQDASPILTSLLDTDAYKLHMQQAVFHHYRHITVAAEFRCRSDE CCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEEEEECCCCC LLGVYADEIRHQVTLMGQLALTSDEFIYLSSLPFFQDDYLHWLRDFRFKPEQVSVAVHDG HHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEECC KLDIRIAGLWCEVIMWEVPLLAVISEIVHRRRSTQVTTDQAVQQLRTKLEQFNALSADID EEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCE ITHFKLMDFGTRRRFSREIQHTVVSTLKDEFPYLVGTSNYDLARTLALAPVGTQAHEWFQ EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHEECCCCCHHHHHHH AHQQISPTLANSQRVALQVWLDEYPNQLGIALTDCITMDAFLRDFDLAFANRYQGLRHDS HHHHCCCHHCCCCEEEEEEEHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GDPIEWGEKAIAHYEKLGIDPMKKVLVFSDNLDLEKALFLYRHFYQRIKLVFGIGTRLTC CCCHHHHHHHHHHHHHHCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE DIPDVKPLNIVIKLVECNDKPVAKLSDSPGKTICQDPAFVDQLRKAFALPLVKKAS CCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA