| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is 22126572
Identifier: 22126572
GI number: 22126572
Start: 2973790
End: 2975952
Strand: Reverse
Name: 22126572
Synonym: y2694
Alternate gene names: NA
Gene position: 2975952-2973790 (Counterclockwise)
Preceding gene: 22126573
Following gene: 22126571
Centisome position: 64.68
GC content: 44.34
Gene sequence:
>2163_bases TTGCGCGCAAAAATGTCGTCACAACCCGATGAAGAATGGGTAAGCAGCATGATGCCGGCAGATCCACAGCGTGGTTACCC TATCAGCAACAGCCAGGCATGGCACGGTGGCATCCATATCAAACATACCGACCACACAGGCGTGCCGGAGCAAGTGCGTG CCATTGCCGACGGCACTGTTTTTTCAGTACGTCAACCGAGTCTGCAGAAGCGAGACTTGCTGCCGTTGAACTACAATGGC CCCACCGATTGCGGTTATGTATTGATTAAGCATGAAACAGAAATTGGCAGCGATGAGGGTGGCAAGGTCGCCTACTGGTC GTTGTATATGCACATGAAAAGCATTGGCAGCACAGTTTCACCAGGTTCAGTTGTCTACCGAAAAGATCCGTTAGGAACCG TCGGCATGGTGGATGGTCAGAACGCCATTCATTTTCAAATATTCTGCGATGACGCCAATATCAAAAAGCTGACGGGTCGT GAAACGCCGGAACTTGATTTAGCAAATAATGGCCGGACCGATGTCGTCTATGGAGACATTCACTTTTATTTGCCTGCCGG AACGCCTGTTTATGACTCGATGCCTAAAGACAACACGCCGGTGTCTTTAATGGCAAATGGTCCGGTGCCCCGCACAAAGT CTGATTTATTTGTGACGATGCGTTTTCATCAGGGAAGTTGCACGATGACAACCTTGCATAAAGCCGTTTTTAGCTCAATG TATCTGGAAGTGGGTGAGCCCCTAACGGATGCCGATGGCGCAGATTATGAATACAACCTTTACAGCAAAGCTTTAACTTT GTACCCGAACAGTCCAAGTGCAGGATATGAACTGCTGCGGTTTGGTCGCGTTATTAATACAGATAATGAAACCTTATCAC CTGCCGGTGCACCTTTGTGGCGAACGATTAATTATCCGGAGGGGAAAGGGGTAGTTAACCTTGCGGCAGCGTCAGTAAAA GTATTCAGTGATGCTGATTTCCCCCACTGGATGGGATGGCAACTGGTTGATGATGATACGGATACGAATAGCCAGTGTAA TTCACCCACAATTACTTTGCGGTGTAAGACTGGGGTGGACTTAAGCGGGATGATTTGTCATTTCCCGCTGGAATGGGATA AAACGACAGTAGATAACCGCTTCCAGTGGCTGGCGAAAGAAAATGATGTTCTGCCGGAGCCTATGGAGCTTTGTGATTTA GGGCCCCTGACCGATCACGCAAAGGCGCTTTGTTTAGCTGAGAATCCACTACCTTCGGGTAGAGTATGGCATTTTGAACC AACGAGGTTTATTGAGCATTTTAGGAAGTGTGGGTGGTTGAGTAATAAGGAAATGAAACAATTAATCCCAACTAAAGCAC TCTCCAACGGACAATGGCAAACCATACCTGACCGATATGGTGATACATCTGTGCTAGCTCGACACTATTCCAGAATAAAT AAGGTATTACGAAAATATTTAATCAACACACCATTCCGAATGGCCTGTTTTTTTGGTAATGCAATACAGGAGACTGCTTG GCTTACCACTACGCATGAAGGTTATGTGTATACTGAAAGAAATCAACGAACACGCGCAATAATCAGACATTACAATATTT GGTATTACCCGTGGTATGGGCGCGGTTTTTTGCAATTAACTAGCCCTGGGAATTACTATAAATATTTTAAATACCGTGGG TATACTTATGATGAAACAGTTAAAATAAAATTGGAAAATGAATATAACCGTTTATATAGGAATGGTTCCATAAGATATTC TGAAAATCATCTTGATGACACTAGCAATCCTGAATTATCCGCAGAAATTCTCAACTGGAGAAATAGCCTTGAAACTGGAG ATTATGAACCAGCCGATAGTGCAGGATTTTATTGGTGCACTACACATATGGCAAAATACGCAGACCCAGAACATATTCTT GAACGGCAAGTGTCAGCGAACCATATTTACTATCGAAGCCCTTCATTTTGGCAAGCCAGTGCAACTGTTAATTTACCGGG AGCAAGGCAGCGAACTAATTATTCAGGGTTAAATGGTTTTATCGAGAGATGCTACGTTTACGGGAGCGCCCTTGCGGTTC TAACAGAATTGAAATTTCCAGACTCGCAAGGAACATATTCTTTAGAAAAACCTGAAGAAAATAATTTAAGGAGAACATTA TGA
Upstream 100 bases:
>100_bases GACAGTAGTGCCAACATTAGCCGTTAAAGCTAAACCACCCACTCAGAAGTATCCATTTTCTTAATTAAAGGATTAATCAA TGATAATCAGCCCTCCTTTC
Downstream 100 bases:
>100_bases ATATAAAAAAATAATTTCGGCAATATTAATAATTTGTTTTTCCGCAAAGGCAGAGATACAACCAAAACCAGAAGAAAATA TAGATTCAAAAAACATAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 720; Mature: 720
Protein sequence:
>720_residues MRAKMSSQPDEEWVSSMMPADPQRGYPISNSQAWHGGIHIKHTDHTGVPEQVRAIADGTVFSVRQPSLQKRDLLPLNYNG PTDCGYVLIKHETEIGSDEGGKVAYWSLYMHMKSIGSTVSPGSVVYRKDPLGTVGMVDGQNAIHFQIFCDDANIKKLTGR ETPELDLANNGRTDVVYGDIHFYLPAGTPVYDSMPKDNTPVSLMANGPVPRTKSDLFVTMRFHQGSCTMTTLHKAVFSSM YLEVGEPLTDADGADYEYNLYSKALTLYPNSPSAGYELLRFGRVINTDNETLSPAGAPLWRTINYPEGKGVVNLAAASVK VFSDADFPHWMGWQLVDDDTDTNSQCNSPTITLRCKTGVDLSGMICHFPLEWDKTTVDNRFQWLAKENDVLPEPMELCDL GPLTDHAKALCLAENPLPSGRVWHFEPTRFIEHFRKCGWLSNKEMKQLIPTKALSNGQWQTIPDRYGDTSVLARHYSRIN KVLRKYLINTPFRMACFFGNAIQETAWLTTTHEGYVYTERNQRTRAIIRHYNIWYYPWYGRGFLQLTSPGNYYKYFKYRG YTYDETVKIKLENEYNRLYRNGSIRYSENHLDDTSNPELSAEILNWRNSLETGDYEPADSAGFYWCTTHMAKYADPEHIL ERQVSANHIYYRSPSFWQASATVNLPGARQRTNYSGLNGFIERCYVYGSALAVLTELKFPDSQGTYSLEKPEENNLRRTL
Sequences:
>Translated_720_residues MRAKMSSQPDEEWVSSMMPADPQRGYPISNSQAWHGGIHIKHTDHTGVPEQVRAIADGTVFSVRQPSLQKRDLLPLNYNG PTDCGYVLIKHETEIGSDEGGKVAYWSLYMHMKSIGSTVSPGSVVYRKDPLGTVGMVDGQNAIHFQIFCDDANIKKLTGR ETPELDLANNGRTDVVYGDIHFYLPAGTPVYDSMPKDNTPVSLMANGPVPRTKSDLFVTMRFHQGSCTMTTLHKAVFSSM YLEVGEPLTDADGADYEYNLYSKALTLYPNSPSAGYELLRFGRVINTDNETLSPAGAPLWRTINYPEGKGVVNLAAASVK VFSDADFPHWMGWQLVDDDTDTNSQCNSPTITLRCKTGVDLSGMICHFPLEWDKTTVDNRFQWLAKENDVLPEPMELCDL GPLTDHAKALCLAENPLPSGRVWHFEPTRFIEHFRKCGWLSNKEMKQLIPTKALSNGQWQTIPDRYGDTSVLARHYSRIN KVLRKYLINTPFRMACFFGNAIQETAWLTTTHEGYVYTERNQRTRAIIRHYNIWYYPWYGRGFLQLTSPGNYYKYFKYRG YTYDETVKIKLENEYNRLYRNGSIRYSENHLDDTSNPELSAEILNWRNSLETGDYEPADSAGFYWCTTHMAKYADPEHIL ERQVSANHIYYRSPSFWQASATVNLPGARQRTNYSGLNGFIERCYVYGSALAVLTELKFPDSQGTYSLEKPEENNLRRTL >Mature_720_residues MRAKMSSQPDEEWVSSMMPADPQRGYPISNSQAWHGGIHIKHTDHTGVPEQVRAIADGTVFSVRQPSLQKRDLLPLNYNG PTDCGYVLIKHETEIGSDEGGKVAYWSLYMHMKSIGSTVSPGSVVYRKDPLGTVGMVDGQNAIHFQIFCDDANIKKLTGR ETPELDLANNGRTDVVYGDIHFYLPAGTPVYDSMPKDNTPVSLMANGPVPRTKSDLFVTMRFHQGSCTMTTLHKAVFSSM YLEVGEPLTDADGADYEYNLYSKALTLYPNSPSAGYELLRFGRVINTDNETLSPAGAPLWRTINYPEGKGVVNLAAASVK VFSDADFPHWMGWQLVDDDTDTNSQCNSPTITLRCKTGVDLSGMICHFPLEWDKTTVDNRFQWLAKENDVLPEPMELCDL GPLTDHAKALCLAENPLPSGRVWHFEPTRFIEHFRKCGWLSNKEMKQLIPTKALSNGQWQTIPDRYGDTSVLARHYSRIN KVLRKYLINTPFRMACFFGNAIQETAWLTTTHEGYVYTERNQRTRAIIRHYNIWYYPWYGRGFLQLTSPGNYYKYFKYRG YTYDETVKIKLENEYNRLYRNGSIRYSENHLDDTSNPELSAEILNWRNSLETGDYEPADSAGFYWCTTHMAKYADPEHIL ERQVSANHIYYRSPSFWQASATVNLPGARQRTNYSGLNGFIERCYVYGSALAVLTELKFPDSQGTYSLEKPEENNLRRTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81953; Mature: 81953
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAKMSSQPDEEWVSSMMPADPQRGYPISNSQAWHGGIHIKHTDHTGVPEQVRAIADGTV CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECCEEEEECCCCCCHHHHHHHHCCCE FSVRQPSLQKRDLLPLNYNGPTDCGYVLIKHETEIGSDEGGKVAYWSLYMHMKSIGSTVS EEECCCCCHHCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEEEHHHHHHHHCCCCC PGSVVYRKDPLGTVGMVDGQNAIHFQIFCDDANIKKLTGRETPELDLANNGRTDVVYGDI CCEEEEECCCCCEEEEECCCCEEEEEEEECCCCCEECCCCCCCCEEECCCCCCEEEEEEE HFYLPAGTPVYDSMPKDNTPVSLMANGPVPRTKSDLFVTMRFHQGSCTMTTLHKAVFSSM EEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHH YLEVGEPLTDADGADYEYNLYSKALTLYPNSPSAGYELLRFGRVINTDNETLSPAGAPLW HHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHCCEECCCCCCCCCCCCCEE RTINYPEGKGVVNLAAASVKVFSDADFPHWMGWQLVDDDTDTNSQCNSPTITLRCKTGVD EEECCCCCCCEEEEEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCC LSGMICHFPLEWDKTTVDNRFQWLAKENDVLPEPMELCDLGPLTDHAKALCLAENPLPSG CCCEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCC RVWHFEPTRFIEHFRKCGWLSNKEMKQLIPTKALSNGQWQTIPDRYGDTSVLARHYSRIN CEEEECHHHHHHHHHHCCCCCCHHHHHHCCHHHCCCCCCEECCCCCCCHHHHHHHHHHHH KVLRKYLINTPFRMACFFGNAIQETAWLTTTHEGYVYTERNQRTRAIIRHYNIWYYPWYG HHHHHHHHCCCCEEEEHHCCHHHHCEEEEEECCCEEEECCCCHHHHHHEECEEEEEEEEC RGFLQLTSPGNYYKYFKYRGYTYDETVKIKLENEYNRLYRNGSIRYSENHLDDTSNPELS CEEEEECCCCCEEEEEEECCCEECCEEEEEECCCHHHHHCCCCEEECCCCCCCCCCCCHH AEILNWRNSLETGDYEPADSAGFYWCTTHMAKYADPEHILERQVSANHIYYRSPSFWQAS HHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHCCCEEEECCCCCEEEE ATVNLPGARQRTNYSGLNGFIERCYVYGSALAVLTELKFPDSQGTYSLEKPEENNLRRTL EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCC >Mature Secondary Structure MRAKMSSQPDEEWVSSMMPADPQRGYPISNSQAWHGGIHIKHTDHTGVPEQVRAIADGTV CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECCEEEEECCCCCCHHHHHHHHCCCE FSVRQPSLQKRDLLPLNYNGPTDCGYVLIKHETEIGSDEGGKVAYWSLYMHMKSIGSTVS EEECCCCCHHCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEEEHHHHHHHHCCCCC PGSVVYRKDPLGTVGMVDGQNAIHFQIFCDDANIKKLTGRETPELDLANNGRTDVVYGDI CCEEEEECCCCCEEEEECCCCEEEEEEEECCCCCEECCCCCCCCEEECCCCCCEEEEEEE HFYLPAGTPVYDSMPKDNTPVSLMANGPVPRTKSDLFVTMRFHQGSCTMTTLHKAVFSSM EEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHH YLEVGEPLTDADGADYEYNLYSKALTLYPNSPSAGYELLRFGRVINTDNETLSPAGAPLW HHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHCCEECCCCCCCCCCCCCEE RTINYPEGKGVVNLAAASVKVFSDADFPHWMGWQLVDDDTDTNSQCNSPTITLRCKTGVD EEECCCCCCCEEEEEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCC LSGMICHFPLEWDKTTVDNRFQWLAKENDVLPEPMELCDLGPLTDHAKALCLAENPLPSG CCCEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCC RVWHFEPTRFIEHFRKCGWLSNKEMKQLIPTKALSNGQWQTIPDRYGDTSVLARHYSRIN CEEEECHHHHHHHHHHCCCCCCHHHHHHCCHHHCCCCCCEECCCCCCCHHHHHHHHHHHH KVLRKYLINTPFRMACFFGNAIQETAWLTTTHEGYVYTERNQRTRAIIRHYNIWYYPWYG HHHHHHHHCCCCEEEEHHCCHHHHCEEEEEECCCEEEECCCCHHHHHHEECEEEEEEEEC RGFLQLTSPGNYYKYFKYRGYTYDETVKIKLENEYNRLYRNGSIRYSENHLDDTSNPELS CEEEEECCCCCEEEEEEECCCEECCEEEEEECCCHHHHHCCCCEEECCCCCCCCCCCCHH AEILNWRNSLETGDYEPADSAGFYWCTTHMAKYADPEHILERQVSANHIYYRSPSFWQAS HHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHCCCEEEECCCCCEEEE ATVNLPGARQRTNYSGLNGFIERCYVYGSALAVLTELKFPDSQGTYSLEKPEENNLRRTL EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA