| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126564
Identifier: 22126564
GI number: 22126564
Start: 2963140
End: 2963610
Strand: Reverse
Name: 22126564
Synonym: y2685
Alternate gene names: NA
Gene position: 2963610-2963140 (Counterclockwise)
Preceding gene: 22126565
Following gene: 22126563
Centisome position: 64.42
GC content: 29.72
Gene sequence:
>471_bases ATGAAAAGAATAATAATGGTTGTTACGATTTTTATCGTATTAGGAATTATTTCTATCACTGTTTTTTATTTTGTTAAGCC TTCTATTTTTCTTTATAATAATACTAATAAAATAATATATGTATATTCTTCGGAAAGTACCTACGGAGTTGAACCCAATG AAAAAGAAGTTGAAGAAATAATAAAAATGAAACCAGATGTTATAGACCCTGGTGAAACATTGAAACTGGCACCATCCATA TTATCTTTACTGAAAAAGAATATCAGAAAGGATACAGGTTGGCGTATTGGGGGTAGATACTCATTCAATTCAGTTGGAGG GGGAGGACAAGCATTTATGCTCACCAGAGCCTCTGGAGTTTGTTCAGTATTGATTACTATCAATGATAATAAATCTGAAT TAGAAGAAATAGAAAAAAGTTATTGTTACAAAAAAATAAAGCCATTTAAAGATAGTTATCCTAATGGATAA
Upstream 100 bases:
>100_bases TTGAATCAGCATCGGACCTTGATCTAGCTATTTCAAGACAAATTCATTGGTGTTGGAATAATGATAATTCGAGTCAAATT GATCACCCGCAGGGTAAGTA
Downstream 100 bases:
>100_bases TTAACCTATCGTCTTTAGTAATAAATAATGAAGGCGAGTGCAATTGATTCGCACGCATTAATAAATATATTGCTCTCACT ATTTATCTATTCATCTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKRIIMVVTIFIVLGIISITVFYFVKPSIFLYNNTNKIIYVYSSESTYGVEPNEKEVEEIIKMKPDVIDPGETLKLAPSI LSLLKKNIRKDTGWRIGGRYSFNSVGGGGQAFMLTRASGVCSVLITINDNKSELEEIEKSYCYKKIKPFKDSYPNG
Sequences:
>Translated_156_residues MKRIIMVVTIFIVLGIISITVFYFVKPSIFLYNNTNKIIYVYSSESTYGVEPNEKEVEEIIKMKPDVIDPGETLKLAPSI LSLLKKNIRKDTGWRIGGRYSFNSVGGGGQAFMLTRASGVCSVLITINDNKSELEEIEKSYCYKKIKPFKDSYPNG >Mature_156_residues MKRIIMVVTIFIVLGIISITVFYFVKPSIFLYNNTNKIIYVYSSESTYGVEPNEKEVEEIIKMKPDVIDPGETLKLAPSI LSLLKKNIRKDTGWRIGGRYSFNSVGGGGQAFMLTRASGVCSVLITINDNKSELEEIEKSYCYKKIKPFKDSYPNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17607; Mature: 17607
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIIMVVTIFIVLGIISITVFYFVKPSIFLYNNTNKIIYVYSSESTYGVEPNEKEVEEI CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHH IKMKPDVIDPGETLKLAPSILSLLKKNIRKDTGWRIGGRYSFNSVGGGGQAFMLTRASGV HHCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCEECCEEECCCCCCCCCEEEEEECCCE CSVLITINDNKSELEEIEKSYCYKKIKPFKDSYPNG EEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKRIIMVVTIFIVLGIISITVFYFVKPSIFLYNNTNKIIYVYSSESTYGVEPNEKEVEEI CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHH IKMKPDVIDPGETLKLAPSILSLLKKNIRKDTGWRIGGRYSFNSVGGGGQAFMLTRASGV HHCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCEECCEEECCCCCCCCCEEEEEECCCE CSVLITINDNKSELEEIEKSYCYKKIKPFKDSYPNG EEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA