| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is folE [H]
Identifier: 22126543
GI number: 22126543
Start: 2938298
End: 2939014
Strand: Reverse
Name: folE [H]
Synonym: y2664
Alternate gene names: 22126543
Gene position: 2939014-2938298 (Counterclockwise)
Preceding gene: 22126544
Following gene: 22126542
Centisome position: 63.88
GC content: 45.61
Gene sequence:
>717_bases GTGACCCGCATCATGCTTGTCTTATCTGGATGCGTAAGCCTGTTGGAGAAAAGAATGTCATCGCTAAGTAAAGAAGCTGA GTTGGTTCATCAAGCGCTGCTGGCCCGTGGTCTTGAAACCCCTTTACGTAAACCAGAATTAGATGCCGAGACGCGCAAAA CTCGGATTCAGGCCCATATGACAGAAGTCATGCATTTGCTGAATCTTGATTTAACCGACGATAGTCTGGCTGATACACCA AGACGCATTGCGAAGATGTATGTTGATGAGATTTTCTCCGGATTGGATTACGAAAATTTCCCTAAAATCACACTGATTCA AAATAAAATGAAAGTTGATGAAATGGTAACGGTACGGGATATCACTCTGACCAGCACCTGCGAACATCATTTTGTGACGA TTGATGGGAAAGCCACCGTCGCTTATATTCCGAAAGACAGTGTCATTGGTTTGTCGAAAATCAACCGTATCGTGCAGTTT TTTGCGCAGCGTCCGCAAGTGCAGGAACGATTAACACAGCAGATCTTGCTCGCATTACAAACCCTGTTGGGTACCAATAA TGTCGCAGTTTCTATTGATGCAGTTCATTATTGCGTTAAAGCACGTGGTATCCGTGATGCGACCAGCGCGACGACCACCA CATCATTAGGCGGGTTATTTAAATCCAGTCAGAATACGCGTCAGGAATTTCTGCGTGCGGTTCGTCACCACGGCTGA
Upstream 100 bases:
>100_bases ACGATGCTCAGTATTGTTCGCAATGAATAACCGGTCGAAATGAAGAACAATCACTGGATAATCATTTCGCTCTCAATTAG AGTGAGAGCGAAATTCGGGT
Downstream 100 bases:
>100_bases TTGGCTTTTTGCCAGAGGGAGGGCCTGTAGGCCCTCGAATACAGGATGTCGAGTATGCGTCAACGCATCGCAACGTTAGA CAGTGCGCGGGGGCTGGCCA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTRIMLVLSGCVSLLEKRMSSLSKEAELVHQALLARGLETPLRKPELDAETRKTRIQAHMTEVMHLLNLDLTDDSLADTP RRIAKMYVDEIFSGLDYENFPKITLIQNKMKVDEMVTVRDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQF FAQRPQVQERLTQQILLALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRQEFLRAVRHHG
Sequences:
>Translated_238_residues MTRIMLVLSGCVSLLEKRMSSLSKEAELVHQALLARGLETPLRKPELDAETRKTRIQAHMTEVMHLLNLDLTDDSLADTP RRIAKMYVDEIFSGLDYENFPKITLIQNKMKVDEMVTVRDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQF FAQRPQVQERLTQQILLALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRQEFLRAVRHHG >Mature_237_residues TRIMLVLSGCVSLLEKRMSSLSKEAELVHQALLARGLETPLRKPELDAETRKTRIQAHMTEVMHLLNLDLTDDSLADTPR RIAKMYVDEIFSGLDYENFPKITLIQNKMKVDEMVTVRDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFF AQRPQVQERLTQQILLALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRQEFLRAVRHHG
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=123, Percent_Identity=44.7154471544715, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI4503949, Length=123, Percent_Identity=44.7154471544715, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI66932970, Length=82, Percent_Identity=48.780487804878, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI66932972, Length=82, Percent_Identity=48.780487804878, Blast_Score=86, Evalue=3e-17, Organism=Escherichia coli, GI1788476, Length=222, Percent_Identity=89.1891891891892, Blast_Score=389, Evalue=1e-110, Organism=Caenorhabditis elegans, GI17560486, Length=189, Percent_Identity=37.5661375661376, Blast_Score=122, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6321706, Length=182, Percent_Identity=40.1098901098901, Blast_Score=127, Evalue=1e-30, Organism=Drosophila melanogaster, GI24656796, Length=122, Percent_Identity=45.0819672131148, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24656791, Length=122, Percent_Identity=45.0819672131148, Blast_Score=109, Evalue=1e-24, Organism=Drosophila melanogaster, GI24656782, Length=122, Percent_Identity=45.0819672131148, Blast_Score=109, Evalue=1e-24,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 26746; Mature: 26615
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIMLVLSGCVSLLEKRMSSLSKEAELVHQALLARGLETPLRKPELDAETRKTRIQAHM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH TEVMHLLNLDLTDDSLADTPRRIAKMYVDEIFSGLDYENFPKITLIQNKMKVDEMVTVRD HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHH ITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQILLALQ EEEECCCCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH TLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRQEFLRAVRHHG HHHCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure TRIMLVLSGCVSLLEKRMSSLSKEAELVHQALLARGLETPLRKPELDAETRKTRIQAHM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH TEVMHLLNLDLTDDSLADTPRRIAKMYVDEIFSGLDYENFPKITLIQNKMKVDEMVTVRD HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHH ITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQILLALQ EEEECCCCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH TLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRQEFLRAVRHHG HHHCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA