| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is 22126472
Identifier: 22126472
GI number: 22126472
Start: 2854278
End: 2855159
Strand: Direct
Name: 22126472
Synonym: y2591
Alternate gene names: NA
Gene position: 2854278-2855159 (Clockwise)
Preceding gene: 22126469
Following gene: 22126473
Centisome position: 62.04
GC content: 51.59
Gene sequence:
>882_bases ATGGCTAAAGAAATATTCTGTGCGTTTGGCGTTGATGTTGACGCGGTGGCCGGTTGGTTAGGATCTTATGGCGGTGAGGA CTCACCCGATGATATTTCACGCGGTATGTTCTCCGGTGAAGTGGGTACGCCACGGTTGCTCAAACTCTTTGCTGACCATA ACCTGCGGGCCACCTGGTTTATTCCGGGTCACTCAATCGAAACATTCCCTGAACAAATGAAAGCGGTAGCCGCGGCTGGA CACGAAGTGGGGATCCATGGTTACAGCCATGAAAACCCTATCGCCATGACACCAGCGCAAGAAGAGGCCGTACTGGATCA CTGTATCGCCCTCCTCACTCAATTGACCGGAAAATCGCCCACGGGCTATGTCGCACCTTGGTGGGAATTTAGCAACGTCA CCAACGAGCTGTTGCTGAAAAAAGGCATTAAATATGACCACAGCCTGATGCACCACGATTTTCACCCCTACTATGTGCGC GTCGGCGACCATTGGACCCGCATCGATTACAGCAAGTCCCCAGACCACTGGATGAAACCATTGCAACGAGGGGCCGAAAC CGCACTGGTGGAGATCCCGGCTAACTGGTACCTGGATGATTTACCCCCCATGATGTTTATCAAGAAAGCGCCCAATAGCC ATGGTTTTGTTAATCCCCGCCATCTGGAAGAGATGTGGCGCGATCAGTTCGACTGGGTATACCGAGAACATGATTATGCC GTATTTACCATGACCATCCATCCTGACGTATCCGGTCGCCCGCAAGTGTTATTAATGCTGGAACGGTTGCTCAAACATAT CCAGAGCCATCAGGGTGTACGTTTCGTGACCTTTGATGAGATTGCTGACGACTACTTGCGCCGTATGCCGCGCAAAATTT GA
Upstream 100 bases:
>100_bases AGGCAGCCAATATTGACCTGCTACTCTGCTCCCGCGTTTTTACAACAGCACGCAAGGTGGCAACTTGCCTGCGATGAATC GCAAACTCAGGAGAAGAACT
Downstream 100 bases:
>100_bases TCCTGAGGCATCCTATTGAACGAGTGATAACAACCATGAACATCTATAAAAAAATATCTGCTGATGGCTGGCAGCCGCAG CAATTAACAATCAAAGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: Polysaccharide Deacetylase Family Protein; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Domain Protein; Hydrolase; Saccharide Deacetylase Slightly; Cyclic Imide Hydrolase; Polysaccharide Deacetylase Domain-Containing Protein; Deacetylase; Urate Catabolism Protein
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MAKEIFCAFGVDVDAVAGWLGSYGGEDSPDDISRGMFSGEVGTPRLLKLFADHNLRATWFIPGHSIETFPEQMKAVAAAG HEVGIHGYSHENPIAMTPAQEEAVLDHCIALLTQLTGKSPTGYVAPWWEFSNVTNELLLKKGIKYDHSLMHHDFHPYYVR VGDHWTRIDYSKSPDHWMKPLQRGAETALVEIPANWYLDDLPPMMFIKKAPNSHGFVNPRHLEEMWRDQFDWVYREHDYA VFTMTIHPDVSGRPQVLLMLERLLKHIQSHQGVRFVTFDEIADDYLRRMPRKI
Sequences:
>Translated_293_residues MAKEIFCAFGVDVDAVAGWLGSYGGEDSPDDISRGMFSGEVGTPRLLKLFADHNLRATWFIPGHSIETFPEQMKAVAAAG HEVGIHGYSHENPIAMTPAQEEAVLDHCIALLTQLTGKSPTGYVAPWWEFSNVTNELLLKKGIKYDHSLMHHDFHPYYVR VGDHWTRIDYSKSPDHWMKPLQRGAETALVEIPANWYLDDLPPMMFIKKAPNSHGFVNPRHLEEMWRDQFDWVYREHDYA VFTMTIHPDVSGRPQVLLMLERLLKHIQSHQGVRFVTFDEIADDYLRRMPRKI >Mature_292_residues AKEIFCAFGVDVDAVAGWLGSYGGEDSPDDISRGMFSGEVGTPRLLKLFADHNLRATWFIPGHSIETFPEQMKAVAAAGH EVGIHGYSHENPIAMTPAQEEAVLDHCIALLTQLTGKSPTGYVAPWWEFSNVTNELLLKKGIKYDHSLMHHDFHPYYVRV GDHWTRIDYSKSPDHWMKPLQRGAETALVEIPANWYLDDLPPMMFIKKAPNSHGFVNPRHLEEMWRDQFDWVYREHDYAV FTMTIHPDVSGRPQVLLMLERLLKHIQSHQGVRFVTFDEIADDYLRRMPRKI
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33682; Mature: 33551
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKEIFCAFGVDVDAVAGWLGSYGGEDSPDDISRGMFSGEVGTPRLLKLFADHNLRATWF CCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEE IPGHSIETFPEQMKAVAAAGHEVGIHGYSHENPIAMTPAQEEAVLDHCIALLTQLTGKSP ECCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCC TGYVAPWWEFSNVTNELLLKKGIKYDHSLMHHDFHPYYVRVGDHWTRIDYSKSPDHWMKP CCCEECCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCEEEEECCCCCCHHHHHH LQRGAETALVEIPANWYLDDLPPMMFIKKAPNSHGFVNPRHLEEMWRDQFDWVYREHDYA HHCCCCEEEEEECCCCCCCCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHEEECCEE VFTMTIHPDVSGRPQVLLMLERLLKHIQSHQGVRFVTFDEIADDYLRRMPRKI EEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCC >Mature Secondary Structure AKEIFCAFGVDVDAVAGWLGSYGGEDSPDDISRGMFSGEVGTPRLLKLFADHNLRATWF CCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEE IPGHSIETFPEQMKAVAAAGHEVGIHGYSHENPIAMTPAQEEAVLDHCIALLTQLTGKSP ECCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCC TGYVAPWWEFSNVTNELLLKKGIKYDHSLMHHDFHPYYVRVGDHWTRIDYSKSPDHWMKP CCCEECCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCEEEEECCCCCCHHHHHH LQRGAETALVEIPANWYLDDLPPMMFIKKAPNSHGFVNPRHLEEMWRDQFDWVYREHDYA HHCCCCEEEEEECCCCCCCCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHEEECCEE VFTMTIHPDVSGRPQVLLMLERLLKHIQSHQGVRFVTFDEIADDYLRRMPRKI EEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA