| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is yebO [C]
Identifier: 22126448
GI number: 22126448
Start: 2829841
End: 2830122
Strand: Reverse
Name: yebO [C]
Synonym: y2567
Alternate gene names: 22126448
Gene position: 2830122-2829841 (Counterclockwise)
Preceding gene: 22126450
Following gene: 22126447
Centisome position: 61.51
GC content: 47.87
Gene sequence:
>282_bases TTGTCAATGTTGGATACAAATATGAGCGCGTTTGGTGTCGCCTCAATCGCCTTACCGCTGCTTACCGTTCTTTTCTTCTT GATCGTTTGGTTTTTTTTGAGCCGGGCGAGCGTGCGGGCCAATGAACAGGTCCGGTTATTACGAGAAATTGCCGAGCAGC AAAAACGTCAGACAGAATTACTTACTGCATTACTGGAGAATGCCACGGGTACCCGTGACGGGCAGAACGACAGTGATACG GTTTCTCCTCTCGATTTCAAAGGCTTTATTCCAGAGCGATAA
Upstream 100 bases:
>100_bases CGTTGATTTTTTAACTATCCGCACAGTCCTCTTTTTCTGATTCACCTTTGTTGTGGGCGGGGTGATAAGATAGTGCCTTC ACCATGCATATGTAATAGGG
Downstream 100 bases:
>100_bases ACGTGTCCCGATGCTGGCACTACCAACAGGCAGTGTCAGCATGTTACCTGCAATTTTGTTGGCTACGGCAAAGGTAATTG CATCATAATTAGGGGGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSMLDTNMSAFGVASIALPLLTVLFFLIVWFFLSRASVRANEQVRLLREIAEQQKRQTELLTALLENATGTRDGQNDSDT VSPLDFKGFIPER
Sequences:
>Translated_93_residues MSMLDTNMSAFGVASIALPLLTVLFFLIVWFFLSRASVRANEQVRLLREIAEQQKRQTELLTALLENATGTRDGQNDSDT VSPLDFKGFIPER >Mature_92_residues SMLDTNMSAFGVASIALPLLTVLFFLIVWFFLSRASVRANEQVRLLREIAEQQKRQTELLTALLENATGTRDGQNDSDTV SPLDFKGFIPER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10462; Mature: 10331
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMLDTNMSAFGVASIALPLLTVLFFLIVWFFLSRASVRANEQVRLLREIAEQQKRQTEL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LTALLENATGTRDGQNDSDTVSPLDFKGFIPER HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SMLDTNMSAFGVASIALPLLTVLFFLIVWFFLSRASVRANEQVRLLREIAEQQKRQTEL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LTALLENATGTRDGQNDSDTVSPLDFKGFIPER HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]