| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is ybtX [C]
Identifier: 22126279
GI number: 22126279
Start: 2648461
End: 2649864
Strand: Reverse
Name: ybtX [C]
Synonym: y2395
Alternate gene names: 22126279
Gene position: 2649864-2648461 (Counterclockwise)
Preceding gene: 22126280
Following gene: 22126278
Centisome position: 57.6
GC content: 59.76
Gene sequence:
>1404_bases TTGAGCAGGGTACTCATGCGCAATTGCTCTCACATCATGGACGTTATCAGGCGCTGTGGCAGGCGCAAATGGCCGCGCGC GTGTGGCGCGACGACGGGGTTTCCGCGTCTGGAGAGTGGGTGCATGAGTGATGTTCAGTCGAATGTGAAACCGCTGACGT TGACGACCGGGCGGGTGATTTTTGCTATTGCCGGCGTCTATGTGACGCAGAGTCTGGTATCGGCGCTGTCTATGCAGTCC TTACCCGCGCTGGTGCGCGCTGCTGGCGGTTCGCTGGCGCTTGCCGGTGCGACAACCCTGTTTATGCTGCCCTGGGCGCT GAAGTTTATTTGGGCGCCGTGGATCGAGCGCTGGCGGCTTCCGCCCGGTAGCCAGGAACGCCGTTCCCGCATGTTAATCC TGCGTGGTCAGGTCGCGCTAGCGGCGATCCTGACTATTGCCGCAGCGATTGGCTGGTTTGGGCGAGAAGGGGGATTCCCC GATACGCAAATCGTCGCGTTATTTGTTCTGTTTATGGTGGCAGGCACGGTCGCCTCCACCATTGATATCGCCAGCGACGG CTTTTGCGTCGATCAACTGACCCGCACGGGTTACGGCTGGGGAAACAGCGTGCAGGTCGGCGGCAGCTATCTGGGAATGA TGTGCGGCGGCGGGGTGTTCCTGATGCTGTCGGCGGCATCCGGCTGGCCTGTCGCCATGCTGATGATGGCGGTGCTGATT ATGGCGCTGTCACTCCCGCTGTGGCGCATTACGGAGCCGACGCGAACAGCGACTATCCCGCATGTTCCGGCGTTAGGTTA TGCGCTAAGGAGGAAGCAGGCGCGCCTGGGCTTACTGCTGGTATTGATGCTGAATTCAGGCATGCGGTTTGTGCTGCCTC TTCTGGCACCGCTGTTGTTGGATCATGGGTTGAGCATGTCCGCATTGGGCGCGCTGTTCAGCGGCGGCAATATTGCAGCG GGCATAGCAGGAACGCTGGCCGGCGGATTGCTGATGAAATACACCTCACCCGGCAGAGCGCTGTTGACGGCTTATGGCGT CCAGGGGATCGCGCTGCTGGCGGTGGTGATGACGCTCATGATGGCGCCGGGTCATCTGCTGCTGCCGATTCTCCAGTGTC TGGTCATTGTCCAGTCCATTTCGCTGGCCTGCGCGCTGGTCTGTCTTTACGCCACGCTGATGTCGCTTTCATCGCCTTTG CAGGCCGGTGTCGACTTCACCCTCTTTCAATGTACTGACGCGGCAATCGCCATTCTGGCAGGCGTTATCGGTGGCGTTGT TGCTCAACATTTTGGCTATGCGGCCTGCTTCCTGTTTGCCGGGGCATTCACGTTGCTGGCGGCGTGGGTTGCTTATATCC GGCTGCATTCGGCAAGAGAACTGATGACAAGCGCAATTGATTGA
Upstream 100 bases:
>100_bases GATAACCTGGTTCACAACCGGACGGTGATTATCATCGCTCACCGTTTATCCACCATCGCCGGGGCCGGAAACATTCTGGT GATGGAAGAGGGACAGGTGG
Downstream 100 bases:
>100_bases TCCGGGAATAACACAGAGAGGTAAGGGATGAAAATCAGTGAATTTCTACATCTGGCGTTACCAGAGGAACAATGGCTACC GACGATTTCTGGCGTTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF3 [H]
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MSRVLMRNCSHIMDVIRRCGRRKWPRACGATTGFPRLESGCMSDVQSNVKPLTLTTGRVIFAIAGVYVTQSLVSALSMQS LPALVRAAGGSLALAGATTLFMLPWALKFIWAPWIERWRLPPGSQERRSRMLILRGQVALAAILTIAAAIGWFGREGGFP DTQIVALFVLFMVAGTVASTIDIASDGFCVDQLTRTGYGWGNSVQVGGSYLGMMCGGGVFLMLSAASGWPVAMLMMAVLI MALSLPLWRITEPTRTATIPHVPALGYALRRKQARLGLLLVLMLNSGMRFVLPLLAPLLLDHGLSMSALGALFSGGNIAA GIAGTLAGGLLMKYTSPGRALLTAYGVQGIALLAVVMTLMMAPGHLLLPILQCLVIVQSISLACALVCLYATLMSLSSPL QAGVDFTLFQCTDAAIAILAGVIGGVVAQHFGYAACFLFAGAFTLLAAWVAYIRLHSARELMTSAID
Sequences:
>Translated_467_residues MSRVLMRNCSHIMDVIRRCGRRKWPRACGATTGFPRLESGCMSDVQSNVKPLTLTTGRVIFAIAGVYVTQSLVSALSMQS LPALVRAAGGSLALAGATTLFMLPWALKFIWAPWIERWRLPPGSQERRSRMLILRGQVALAAILTIAAAIGWFGREGGFP DTQIVALFVLFMVAGTVASTIDIASDGFCVDQLTRTGYGWGNSVQVGGSYLGMMCGGGVFLMLSAASGWPVAMLMMAVLI MALSLPLWRITEPTRTATIPHVPALGYALRRKQARLGLLLVLMLNSGMRFVLPLLAPLLLDHGLSMSALGALFSGGNIAA GIAGTLAGGLLMKYTSPGRALLTAYGVQGIALLAVVMTLMMAPGHLLLPILQCLVIVQSISLACALVCLYATLMSLSSPL QAGVDFTLFQCTDAAIAILAGVIGGVVAQHFGYAACFLFAGAFTLLAAWVAYIRLHSARELMTSAID >Mature_466_residues SRVLMRNCSHIMDVIRRCGRRKWPRACGATTGFPRLESGCMSDVQSNVKPLTLTTGRVIFAIAGVYVTQSLVSALSMQSL PALVRAAGGSLALAGATTLFMLPWALKFIWAPWIERWRLPPGSQERRSRMLILRGQVALAAILTIAAAIGWFGREGGFPD TQIVALFVLFMVAGTVASTIDIASDGFCVDQLTRTGYGWGNSVQVGGSYLGMMCGGGVFLMLSAASGWPVAMLMMAVLIM ALSLPLWRITEPTRTATIPHVPALGYALRRKQARLGLLLVLMLNSGMRFVLPLLAPLLLDHGLSMSALGALFSGGNIAAG IAGTLAGGLLMKYTSPGRALLTAYGVQGIALLAVVMTLMMAPGHLLLPILQCLVIVQSISLACALVCLYATLMSLSSPLQ AGVDFTLFQCTDAAIAILAGVIGGVVAQHFGYAACFLFAGAFTLLAAWVAYIRLHSARELMTSAID
Specific function: Probably Acts As A Permease In The Beta-Lactamase Induction System And In Peptidoglycan Recycling. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli AmpG and yeast YBR220c [H]
Homologues:
Organism=Escherichia coli, GI1786636, Length=374, Percent_Identity=26.7379679144385, Blast_Score=72, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004752 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49471; Mature: 49340
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVLMRNCSHIMDVIRRCGRRKWPRACGATTGFPRLESGCMSDVQSNVKPLTLTTGRVI CCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCEEEECCHHH FAIAGVYVTQSLVSALSMQSLPALVRAAGGSLALAGATTLFMLPWALKFIWAPWIERWRL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCC PPGSQERRSRMLILRGQVALAAILTIAAAIGWFGREGGFPDTQIVALFVLFMVAGTVAST CCCCHHHHCCEEHEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH IDIASDGFCVDQLTRTGYGWGNSVQVGGSYLGMMCGGGVFLMLSAASGWPVAMLMMAVLI HHHCCCCCHHHHHHHCCCCCCCCEEECHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH MALSLPLWRITEPTRTATIPHVPALGYALRRKQARLGLLLVLMLNSGMRFVLPLLAPLLL HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH DHGLSMSALGALFSGGNIAAGIAGTLAGGLLMKYTSPGRALLTAYGVQGIALLAVVMTLM HCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHH MAPGHLLLPILQCLVIVQSISLACALVCLYATLMSLSSPLQAGVDFTLFQCTDAAIAILA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEHHHHHHHHHHH GVIGGVVAQHFGYAACFLFAGAFTLLAAWVAYIRLHSARELMTSAID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SRVLMRNCSHIMDVIRRCGRRKWPRACGATTGFPRLESGCMSDVQSNVKPLTLTTGRVI CCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCEEEECCHHH FAIAGVYVTQSLVSALSMQSLPALVRAAGGSLALAGATTLFMLPWALKFIWAPWIERWRL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCC PPGSQERRSRMLILRGQVALAAILTIAAAIGWFGREGGFPDTQIVALFVLFMVAGTVAST CCCCHHHHCCEEHEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH IDIASDGFCVDQLTRTGYGWGNSVQVGGSYLGMMCGGGVFLMLSAASGWPVAMLMMAVLI HHHCCCCCHHHHHHHCCCCCCCCEEECHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH MALSLPLWRITEPTRTATIPHVPALGYALRRKQARLGLLLVLMLNSGMRFVLPLLAPLLL HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH DHGLSMSALGALFSGGNIAAGIAGTLAGGLLMKYTSPGRALLTAYGVQGIALLAVVMTLM HCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHH MAPGHLLLPILQCLVIVQSISLACALVCLYATLMSLSSPLQAGVDFTLFQCTDAAIAILA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEHHHHHHHHHHH GVIGGVVAQHFGYAACFLFAGAFTLLAAWVAYIRLHSARELMTSAID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1956282; 7542800 [H]