| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is mmlH [H]
Identifier: 22126263
GI number: 22126263
Start: 2626946
End: 2628223
Strand: Direct
Name: mmlH [H]
Synonym: y2379
Alternate gene names: 22126263
Gene position: 2626946-2628223 (Clockwise)
Preceding gene: 22126262
Following gene: 22126264
Centisome position: 57.1
GC content: 50.31
Gene sequence:
>1278_bases GTGAGGTGCTCACAAGAGTTAAAAAGCCAGTCTGTAAAGGAGATATTTATGCGTTGGTTTAGCGATCTCAACCAGACAGA AAGAAAAACTTTCATTGCTGCTTTTGGCGGTTGGGCATTGGATGCGCTAGATTTCATGGTTTTTACATTCGTGATTGCTA CGCTGATGGCTCTCTGGCAAATCGACGCAGGCCAGGCCGGAATGTTGAGCACCGTCACCCTGCTTTTCTCCGCTATTGGT GGCTGGGGTGCGGGTATCCTTGCTGATCGTTATGGCAGGGTGCGTATCCTGCAAATAACTATTTTATGGTTCTCCTTATG TACGGTACTCATCGGATTTGCTCAGAACTTCGAACACGTTTTCATCCTACGCGCGCTACAAGGTTTAGGTTTTGGTGGTG AATGGGCCGTAGGTTCTGTATTGATGGGGGAAATCGTCCGCGCCGAACATCGCGGGAAAGCCGTAGGCACCGTGCAAAGT GGATGGGCGATTGGTTGGGGTGCAGCAGCCTTGCTTTACACGCTAATGTTCTCGGTACTATCAGAGGAGTGGGCGTGGCG CGCATTATTCTGGATTGGTGTGCTTCCCGCCCTTTTAGTACTCTACATACGTAAAAACGTCCCAGAACCCGCGTTATTCC TGAAATCCCGCCACGAGCAGCAAGCCAAGGATCGACGCGTTTCTTCCTTCGCCATTTTCTCCCCCGCGCTACTCAAGACC ACCGTTCTGGCTTCTTTACTCTGTACCGGAGTGCAAGGCGGCTACTACGCCATCACAACTTGGCTGCCCACTTTTCTCAA ACTCGAACGCAATCTCTCGGTGATCGGTACTGGTGGGTATCTCATGGTGATTATATTTGGCTCTTTCGTCGGCTATATTT GTGGCGCTTATCTCACCGACAAACTTGGGCGACGGGCAAATCTGATTATCTTCTCACTGCTGTCGTGTATAACAATTTTT GCTTATACCCAACTTACGCTGACCAACACGCAGATGCTCGTTCTGGGATTCCCACTCGGCTTTTCGGCATCCGGGATCTT CAGCGGCATGGGTGCCTTTCTCACTGAGCTTTTTCCTTCGGCGGTACGTGCTACAGGACAAGGTTTTACCTATAGTTTTG GTCGTGCCGTCGGTGCACTCTTTCCGGGGCTGGTCGGCTATCTGAGTCAGTCAAGTAGTCTGGCATTTGCCATTGGAGTC TTCGCTGGCAGTGCCTATTGCATCGTATTGGTAATGAGCCTATTGCTGCCCGAGACCAAAAATAAACAGCTAGAATAA
Upstream 100 bases:
>100_bases ATTTGCTCGCCGCTTGGGTACCCGATGAGCAGGTGCGCAACCGGATCTTGGTCGATAACCCTGCTCGTCTATATGATTTT TAAAAATAACAAAATAACTT
Downstream 100 bases:
>100_bases GTGACGATTTATGGCCATGAGCATCAGACTGTTTCTCTGATATTTATGCTTCTAAGCTGCCTGTACAACAGTGAACAGAA AGCAACGCATCCGTTTGGAT
Product: major facilitator superfamily permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MRCSQELKSQSVKEIFMRWFSDLNQTERKTFIAAFGGWALDALDFMVFTFVIATLMALWQIDAGQAGMLSTVTLLFSAIG GWGAGILADRYGRVRILQITILWFSLCTVLIGFAQNFEHVFILRALQGLGFGGEWAVGSVLMGEIVRAEHRGKAVGTVQS GWAIGWGAAALLYTLMFSVLSEEWAWRALFWIGVLPALLVLYIRKNVPEPALFLKSRHEQQAKDRRVSSFAIFSPALLKT TVLASLLCTGVQGGYYAITTWLPTFLKLERNLSVIGTGGYLMVIIFGSFVGYICGAYLTDKLGRRANLIIFSLLSCITIF AYTQLTLTNTQMLVLGFPLGFSASGIFSGMGAFLTELFPSAVRATGQGFTYSFGRAVGALFPGLVGYLSQSSSLAFAIGV FAGSAYCIVLVMSLLLPETKNKQLE
Sequences:
>Translated_425_residues MRCSQELKSQSVKEIFMRWFSDLNQTERKTFIAAFGGWALDALDFMVFTFVIATLMALWQIDAGQAGMLSTVTLLFSAIG GWGAGILADRYGRVRILQITILWFSLCTVLIGFAQNFEHVFILRALQGLGFGGEWAVGSVLMGEIVRAEHRGKAVGTVQS GWAIGWGAAALLYTLMFSVLSEEWAWRALFWIGVLPALLVLYIRKNVPEPALFLKSRHEQQAKDRRVSSFAIFSPALLKT TVLASLLCTGVQGGYYAITTWLPTFLKLERNLSVIGTGGYLMVIIFGSFVGYICGAYLTDKLGRRANLIIFSLLSCITIF AYTQLTLTNTQMLVLGFPLGFSASGIFSGMGAFLTELFPSAVRATGQGFTYSFGRAVGALFPGLVGYLSQSSSLAFAIGV FAGSAYCIVLVMSLLLPETKNKQLE >Mature_425_residues MRCSQELKSQSVKEIFMRWFSDLNQTERKTFIAAFGGWALDALDFMVFTFVIATLMALWQIDAGQAGMLSTVTLLFSAIG GWGAGILADRYGRVRILQITILWFSLCTVLIGFAQNFEHVFILRALQGLGFGGEWAVGSVLMGEIVRAEHRGKAVGTVQS GWAIGWGAAALLYTLMFSVLSEEWAWRALFWIGVLPALLVLYIRKNVPEPALFLKSRHEQQAKDRRVSSFAIFSPALLKT TVLASLLCTGVQGGYYAITTWLPTFLKLERNLSVIGTGGYLMVIIFGSFVGYICGAYLTDKLGRRANLIIFSLLSCITIF AYTQLTLTNTQMLVLGFPLGFSASGIFSGMGAFLTELFPSAVRATGQGFTYSFGRAVGALFPGLVGYLSQSSSLAFAIGV FAGSAYCIVLVMSLLLPETKNKQLE
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=446, Percent_Identity=22.8699551569507, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI213021148, Length=445, Percent_Identity=25.8426966292135, Blast_Score=84, Evalue=2e-16, Organism=Escherichia coli, GI87082404, Length=374, Percent_Identity=29.144385026738, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI87082231, Length=464, Percent_Identity=27.5862068965517, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1790550, Length=454, Percent_Identity=26.6519823788546, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI1788292, Length=433, Percent_Identity=24.0184757505774, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87081723, Length=343, Percent_Identity=28.8629737609329, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI87082159, Length=390, Percent_Identity=25.3846153846154, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1789941, Length=443, Percent_Identity=26.6365688487585, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1788942, Length=331, Percent_Identity=24.1691842900302, Blast_Score=66, Evalue=4e-12, Organism=Caenorhabditis elegans, GI32564663, Length=444, Percent_Identity=25, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46455; Mature: 46455
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCSQELKSQSVKEIFMRWFSDLNQTERKTFIAAFGGWALDALDFMVFTFVIATLMALWQ CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH IDAGQAGMLSTVTLLFSAIGGWGAGILADRYGRVRILQITILWFSLCTVLIGFAQNFEHV CCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHH FILRALQGLGFGGEWAVGSVLMGEIVRAEHRGKAVGTVQSGWAIGWGAAALLYTLMFSVL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHH SEEWAWRALFWIGVLPALLVLYIRKNVPEPALFLKSRHEQQAKDRRVSSFAIFSPALLKT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVLASLLCTGVQGGYYAITTWLPTFLKLERNLSVIGTGGYLMVIIFGSFVGYICGAYLTD HHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH KLGRRANLIIFSLLSCITIFAYTQLTLTNTQMLVLGFPLGFSASGIFSGMGAFLTELFPS HHCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH AVRATGQGFTYSFGRAVGALFPGLVGYLSQSSSLAFAIGVFAGSAYCIVLVMSLLLPETK HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCC NKQLE CCCCC >Mature Secondary Structure MRCSQELKSQSVKEIFMRWFSDLNQTERKTFIAAFGGWALDALDFMVFTFVIATLMALWQ CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH IDAGQAGMLSTVTLLFSAIGGWGAGILADRYGRVRILQITILWFSLCTVLIGFAQNFEHV CCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHH FILRALQGLGFGGEWAVGSVLMGEIVRAEHRGKAVGTVQSGWAIGWGAAALLYTLMFSVL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHH SEEWAWRALFWIGVLPALLVLYIRKNVPEPALFLKSRHEQQAKDRRVSSFAIFSPALLKT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVLASLLCTGVQGGYYAITTWLPTFLKLERNLSVIGTGGYLMVIIFGSFVGYICGAYLTD HHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH KLGRRANLIIFSLLSCITIFAYTQLTLTNTQMLVLGFPLGFSASGIFSGMGAFLTELFPS HHCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH AVRATGQGFTYSFGRAVGALFPGLVGYLSQSSSLAFAIGVFAGSAYCIVLVMSLLLPETK HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCC NKQLE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]