| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is lysN [H]
Identifier: 22126259
GI number: 22126259
Start: 2622569
End: 2623756
Strand: Reverse
Name: lysN [H]
Synonym: y2375
Alternate gene names: 22126259
Gene position: 2623756-2622569 (Counterclockwise)
Preceding gene: 22126261
Following gene: 22126256
Centisome position: 57.03
GC content: 47.22
Gene sequence:
>1188_bases TTGGTTGACCTTTGTGGAAGAACTGCAATGAATAAAATTATAACGGATCAGCGTCACCAATTTTCCTCACGAGTGAATGA CCTTCACCCGTCGCCAATTAGGGAAATACTGTCTGTCATTGATCGTCCGGGAATGATCTCGTTTGCCGGCGGATTACCCG CAGTAGAAAGTTTTCCTCATATGAGCCTTGAGGGAATGCCGCAGCCGATGCTACAATATGGCGCGAGTGAAGGGGAGCTG GAATTACGTCAACAGATTGCTCAAAATTTGTGTGAGCGAGGTTTATCCTGTACTGAGGAACAAGTCCTGATTATTTCAGG CTCACAGCAGGGCATTGATCTGGTCGCTAAGTTGTTTATTGACGAGGGAACCCCCGTCGCCGTTGAATCGCCTACCTATC TGGCTGCGTTACAGGTATTCCGTTTTTTCGGTGCTCAATTTGTGGCTTATGATTCAACTCAGCCTGATATCGACAAGCTT CGCACCGAAAAACCTGCTTTTGCTTATACTATTCCGACCTTCCAGAATCCAAGCGGTCACTGCCTTGATACTGAACAACG AGAGTTACTGGCGAAGACATGTGATGACATTATGTTACCGCTCTTTGAAGATGACCCGTACCATGACTTGGTTTATGACC CTTGTGAGCGTAAGCCAGTGTGTGCTTCATTACAGCGAGCTTCGTGGATTTACCAAGGATCTTTTTCTAAAAGTTTATCC CCGGCGCTGCGTTTGGGCTATCTTGTCGCATCTTCAGAATTGATTCCCTATTTGACACGTTTAAAACAAGCCGCAGATTT GCACAGCAGCCGGATCAGCCAATGGTTAGTGTTACAGCAGTTGCGTAGCCCTAGGCATACTGAGCATATGCATGAACTGG CAGCCTATTATCGAACTCGCCGTGATGCGTTTGAAATCTCCCTACAACGCCATTTTGGCTCTCTTGCGACGTGGAAAAAA CCGGCTGGAGGGCTGTTCTTCTGGTTAACCCTTAATCGCTGCATAGATACTCGTCAACTCTTGCCTAAAGCGCTGGCAAG CAATATTGCATTTATGCCCGGAGAGTCGTTCCTCCCTCATTCATCTGAAGGCTGCGGTCAGTTACGGCTTAATTTTAGCC ATGCGACGGAAGAACAAGCGGATGTAGGGCTGAAAATATTAGCGGGTTTAGTGCAGGAACATGCATAA
Upstream 100 bases:
>100_bases TCGGTGTATCAATAAGACCCTGTTAGTGTTAGCAATAGGGTAGAAAGTGAAATTATGTTGACGTAATGAGCAGCGCATTT TACTTTCCATAAATGCCAAA
Downstream 100 bases:
>100_bases GATGGGCTATCGGTGAATCTCATTGACTCATTAATTGAAGACGCTGAATGAATCGAAATAAATTTCAGATGGACCGAGTA ACGAAAGCTGCCAACGCACA
Product: aminotransferase
Products: NA
Alternate protein names: 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT [H]
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MVDLCGRTAMNKIITDQRHQFSSRVNDLHPSPIREILSVIDRPGMISFAGGLPAVESFPHMSLEGMPQPMLQYGASEGEL ELRQQIAQNLCERGLSCTEEQVLIISGSQQGIDLVAKLFIDEGTPVAVESPTYLAALQVFRFFGAQFVAYDSTQPDIDKL RTEKPAFAYTIPTFQNPSGHCLDTEQRELLAKTCDDIMLPLFEDDPYHDLVYDPCERKPVCASLQRASWIYQGSFSKSLS PALRLGYLVASSELIPYLTRLKQAADLHSSRISQWLVLQQLRSPRHTEHMHELAAYYRTRRDAFEISLQRHFGSLATWKK PAGGLFFWLTLNRCIDTRQLLPKALASNIAFMPGESFLPHSSEGCGQLRLNFSHATEEQADVGLKILAGLVQEHA
Sequences:
>Translated_395_residues MVDLCGRTAMNKIITDQRHQFSSRVNDLHPSPIREILSVIDRPGMISFAGGLPAVESFPHMSLEGMPQPMLQYGASEGEL ELRQQIAQNLCERGLSCTEEQVLIISGSQQGIDLVAKLFIDEGTPVAVESPTYLAALQVFRFFGAQFVAYDSTQPDIDKL RTEKPAFAYTIPTFQNPSGHCLDTEQRELLAKTCDDIMLPLFEDDPYHDLVYDPCERKPVCASLQRASWIYQGSFSKSLS PALRLGYLVASSELIPYLTRLKQAADLHSSRISQWLVLQQLRSPRHTEHMHELAAYYRTRRDAFEISLQRHFGSLATWKK PAGGLFFWLTLNRCIDTRQLLPKALASNIAFMPGESFLPHSSEGCGQLRLNFSHATEEQADVGLKILAGLVQEHA >Mature_395_residues MVDLCGRTAMNKIITDQRHQFSSRVNDLHPSPIREILSVIDRPGMISFAGGLPAVESFPHMSLEGMPQPMLQYGASEGEL ELRQQIAQNLCERGLSCTEEQVLIISGSQQGIDLVAKLFIDEGTPVAVESPTYLAALQVFRFFGAQFVAYDSTQPDIDKL RTEKPAFAYTIPTFQNPSGHCLDTEQRELLAKTCDDIMLPLFEDDPYHDLVYDPCERKPVCASLQRASWIYQGSFSKSLS PALRLGYLVASSELIPYLTRLKQAADLHSSRISQWLVLQQLRSPRHTEHMHELAAYYRTRRDAFEISLQRHFGSLATWKK PAGGLFFWLTLNRCIDTRQLLPKALASNIAFMPGESFLPHSSEGCGQLRLNFSHATEEQADVGLKILAGLVQEHA
Specific function: Catalyzes the transfer of an amino group between 2- oxoadipate (2-OA) and glutamate (Glu) to yield alpha-aminodipate (AAA). It can also transaminate glutamate, leucine, and aromatic amino acids. It also conbtributes in the biosynthesis of other amino acid
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705897, Length=410, Percent_Identity=28.780487804878, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI33469970, Length=410, Percent_Identity=28.780487804878, Blast_Score=156, Evalue=4e-38, Organism=Escherichia coli, GI1787710, Length=378, Percent_Identity=25.6613756613757, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1790797, Length=284, Percent_Identity=24.6478873239437, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI21356535, Length=359, Percent_Identity=23.6768802228412, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.39 [H]
Molecular weight: Translated: 44311; Mature: 44311
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDLCGRTAMNKIITDQRHQFSSRVNDLHPSPIREILSVIDRPGMISFAGGLPAVESFPH CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHCCC MSLEGMPQPMLQYGASEGELELRQQIAQNLCERGLSCTEEQVLIISGSQQGIDLVAKLFI CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH DEGTPVAVESPTYLAALQVFRFFGAQFVAYDSTQPDIDKLRTEKPAFAYTIPTFQNPSGH CCCCCEEECCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCCCEEEECCCCCCCCCC CLDTEQRELLAKTCDDIMLPLFEDDPYHDLVYDPCERKPVCASLQRASWIYQGSFSKSLS CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCC PALRLGYLVASSELIPYLTRLKQAADLHSSRISQWLVLQQLRSPRHTEHMHELAAYYRTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RDAFEISLQRHFGSLATWKKPAGGLFFWLTLNRCIDTRQLLPKALASNIAFMPGESFLPH HHHHHHHHHHHHCHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCEEECCCCCCCCC SSEGCGQLRLNFSHATEEQADVGLKILAGLVQEHA CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVDLCGRTAMNKIITDQRHQFSSRVNDLHPSPIREILSVIDRPGMISFAGGLPAVESFPH CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHCCC MSLEGMPQPMLQYGASEGELELRQQIAQNLCERGLSCTEEQVLIISGSQQGIDLVAKLFI CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH DEGTPVAVESPTYLAALQVFRFFGAQFVAYDSTQPDIDKLRTEKPAFAYTIPTFQNPSGH CCCCCEEECCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCCCEEEECCCCCCCCCC CLDTEQRELLAKTCDDIMLPLFEDDPYHDLVYDPCERKPVCASLQRASWIYQGSFSKSLS CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCC PALRLGYLVASSELIPYLTRLKQAADLHSSRISQWLVLQQLRSPRHTEHMHELAAYYRTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RDAFEISLQRHFGSLATWKKPAGGLFFWLTLNRCIDTRQLLPKALASNIAFMPGESFLPH HHHHHHHHHHHHCHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCEEECCCCCCCCC SSEGCGQLRLNFSHATEEQADVGLKILAGLVQEHA CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA