| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is fabH [H]
Identifier: 22126220
GI number: 22126220
Start: 2569739
End: 2570248
Strand: Reverse
Name: fabH [H]
Synonym: y2335
Alternate gene names: 22126220
Gene position: 2570248-2569739 (Counterclockwise)
Preceding gene: 22126222
Following gene: 22126219
Centisome position: 55.87
GC content: 49.8
Gene sequence:
>510_bases ATGTCGACATTATTAATTTCAGCACCTCATCTGGCGTTCAAAATTATCGCCACAGGGGTATCGTTACCCCCTGATAGGGT GGAATCCTCGACGTTGGATCGTAAACTCAATAAGCCTGTCGGTTATGTAGAACAACGTTCTGGTGTCCGGCATCGTTATC ATGCGACGGCAGATGCTAACCAAGCTGAGTTAGCGGCGGCAGCACTGCATGATGCCCTTGAGCGCCATGGGATCAATCCT TCCTCAATCGATTTATTAATATCAGCCTCGGCTATTGCCTACCAGGCCCTACCGTGCACGGCGGTGCATATTCTCAAAAT AGCGGGTCTGGCGCCTCGCATTGCTGGGTTTGATATCAATAGCAGTTGCGTGAGCTTTATTTCCGCATTACAGGTGGCTG CGGGGCTACTGAATGCCGGAACTTATCAGCGTATCGCTATTGTTTCAGCCGATCTGGCATCACGAGGTATTGACTGGAAT GATGAGGAGATCTTCACTGATCTTCGGTGA
Upstream 100 bases:
>100_bases TTTTCGTTCCCCAATAATTAGGGGCCGCCAAAGGGAGATTTCTCCCCAGCCACATACTGGCAATTCACGTTTCAAGCGCT AAAAAGGTATCTATCTTTCC
Downstream 100 bases:
>100_bases TGGTGCCGCATGTGCCATTGTGGAACGAGGAGATGGCCGCAGTGGCATATTAGCCAGTCTGGTTGAAATGTATCCTACGG GCAGTGAGTTATGTGAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MSTLLISAPHLAFKIIATGVSLPPDRVESSTLDRKLNKPVGYVEQRSGVRHRYHATADANQAELAAAALHDALERHGINP SSIDLLISASAIAYQALPCTAVHILKIAGLAPRIAGFDINSSCVSFISALQVAAGLLNAGTYQRIAIVSADLASRGIDWN DEEIFTDLR
Sequences:
>Translated_169_residues MSTLLISAPHLAFKIIATGVSLPPDRVESSTLDRKLNKPVGYVEQRSGVRHRYHATADANQAELAAAALHDALERHGINP SSIDLLISASAIAYQALPCTAVHILKIAGLAPRIAGFDINSSCVSFISALQVAAGLLNAGTYQRIAIVSADLASRGIDWN DEEIFTDLR >Mature_168_residues STLLISAPHLAFKIIATGVSLPPDRVESSTLDRKLNKPVGYVEQRSGVRHRYHATADANQAELAAAALHDALERHGINPS SIDLLISASAIAYQALPCTAVHILKIAGLAPRIAGFDINSSCVSFISALQVAAGLLNAGTYQRIAIVSADLASRGIDWND EEIFTDLR
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=157, Percent_Identity=28.6624203821656, Blast_Score=65, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 17998; Mature: 17867
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLLISAPHLAFKIIATGVSLPPDRVESSTLDRKLNKPVGYVEQRSGVRHRYHATADAN CCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCC QAELAAAALHDALERHGINPSSIDLLISASAIAYQALPCTAVHILKIAGLAPRIAGFDIN HHHHHHHHHHHHHHHCCCCCCHHEEEEEHHHHHHHCCCHHHHHHHHHHCCCCHHCCCCCC SSCVSFISALQVAAGLLNAGTYQRIAIVSADLASRGIDWNDEEIFTDLR HHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHCCCCCCCHHHHCCCC >Mature Secondary Structure STLLISAPHLAFKIIATGVSLPPDRVESSTLDRKLNKPVGYVEQRSGVRHRYHATADAN CCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCC QAELAAAALHDALERHGINPSSIDLLISASAIAYQALPCTAVHILKIAGLAPRIAGFDIN HHHHHHHHHHHHHHHCCCCCCHHEEEEEHHHHHHHCCCHHHHHHHHHHCCCCHHCCCCCC SSCVSFISALQVAAGLLNAGTYQRIAIVSADLASRGIDWNDEEIFTDLR HHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]