| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is 22126215
Identifier: 22126215
GI number: 22126215
Start: 2566128
End: 2567237
Strand: Reverse
Name: 22126215
Synonym: y2330
Alternate gene names: NA
Gene position: 2567237-2566128 (Counterclockwise)
Preceding gene: 22126216
Following gene: 22126214
Centisome position: 55.8
GC content: 52.61
Gene sequence:
>1110_bases ATGGATAAGCAACTGATGATGGAACATTTTGATGTGATGAACACGCAGGGTCTACACCGTGACGTGCTGATGGCATGTGC GCTTGGCAGTGAGCAAGATCGCGATTTTTCACGTCAAACCGGGAAGTTCAGCGTTGGGTTATCATCTGGCACCTCGGGCC AACGTGGTCTCTTTGTGGTCAGCCCTCAAGAACAGCAACTCTGGGCGGGGGGCATTCTGGCTAAAATGTTGCCCGATGGC GTATTCGCGGGTGAGCGTGTGGCGCTATTTCTGCGGGCGGATAATAACCTTTACCAAAGTGTTAACAACCGTTGGTTGAG TTTGGCGTTCTACGATCTTTTTCAGCCTTTTCAGTCTCACGCAGGTCTTCTGGAACAGCAGTCGCCGACGATTATCGTCG CACCGGCACAGGTGCTACGGGCGTTAGCGTTGGCGGTGATGCGCGGAGAACTGCACCTCACGGTTAAAAAGGTGATTTCT GTCGCCGAGGTGTTGGATGAACAAGATCGTCAACTCCTACAACAGGTTTTTGGTCACGTTGGTGAAGTCTATCAGGCGAC AGAAGGCTTCTTAGCTGCCAGTTGTTCCCACGGCACCTTGCACCTGAATGAAGAATTTCTACACATTGAACCGCAATGGA TCGATGAGCGGCGCTTTACCCCAGTTATCACCGATTTTACGCGACAAACCCAACCTATCGTGCGTTACAAACTGGATGAT GTGCTGGTAGTGAGCGATAAGCCCTGTCCTTGTGGCAACCCTGCGCGGGCGATTAGCCATATTGAAGGGCGTTGGGATGA CCAGTTACTGCTTCCTGACCCGCAAGGCATATTGCAGGTGATATTTGCCGATCTCTGTAGTCGGGTATTGGCCACCGCGT TACCGCTGACGGCGGATTACCGTCTGATTCAGCGTGGCGACCATCATCTACATTTGATGGCCGATTGCACGGCTAGCGAA CTGGAGTGTTGTCGGCGTGCGATGGTATTGATGCTTCAGCAGCAGGGTATTGAGACCGAGAGGTTATGTTGGCAGTTAGA GGCAGTGGCCGTGATCCCACAATTTGATCGCAAAAGGCGGCGTATTATTCGTCAGGGCGTCGCAGGGTGA
Upstream 100 bases:
>100_bases TTATCAGGTCAAAAAACTTCAGCAATTTTCTCAACAGGTATTAGCTAATAGCCCTTGGTTCAGACGCTACGCCTCACAGC CGATCACGGCGTGGCCACTG
Downstream 100 bases:
>100_bases AAACAGGGCTATTTCTGGCACCCATCAAGGCGGTTAGCTGGTTGGCGGTATTGCCCTGGCATGGGGAGCGGGCGTTATAG CGCAGTGGGTAAATGGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Co Synthetase; AMP-Dependent Synthetase And Ligase
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MDKQLMMEHFDVMNTQGLHRDVLMACALGSEQDRDFSRQTGKFSVGLSSGTSGQRGLFVVSPQEQQLWAGGILAKMLPDG VFAGERVALFLRADNNLYQSVNNRWLSLAFYDLFQPFQSHAGLLEQQSPTIIVAPAQVLRALALAVMRGELHLTVKKVIS VAEVLDEQDRQLLQQVFGHVGEVYQATEGFLAASCSHGTLHLNEEFLHIEPQWIDERRFTPVITDFTRQTQPIVRYKLDD VLVVSDKPCPCGNPARAISHIEGRWDDQLLLPDPQGILQVIFADLCSRVLATALPLTADYRLIQRGDHHLHLMADCTASE LECCRRAMVLMLQQQGIETERLCWQLEAVAVIPQFDRKRRRIIRQGVAG
Sequences:
>Translated_369_residues MDKQLMMEHFDVMNTQGLHRDVLMACALGSEQDRDFSRQTGKFSVGLSSGTSGQRGLFVVSPQEQQLWAGGILAKMLPDG VFAGERVALFLRADNNLYQSVNNRWLSLAFYDLFQPFQSHAGLLEQQSPTIIVAPAQVLRALALAVMRGELHLTVKKVIS VAEVLDEQDRQLLQQVFGHVGEVYQATEGFLAASCSHGTLHLNEEFLHIEPQWIDERRFTPVITDFTRQTQPIVRYKLDD VLVVSDKPCPCGNPARAISHIEGRWDDQLLLPDPQGILQVIFADLCSRVLATALPLTADYRLIQRGDHHLHLMADCTASE LECCRRAMVLMLQQQGIETERLCWQLEAVAVIPQFDRKRRRIIRQGVAG >Mature_369_residues MDKQLMMEHFDVMNTQGLHRDVLMACALGSEQDRDFSRQTGKFSVGLSSGTSGQRGLFVVSPQEQQLWAGGILAKMLPDG VFAGERVALFLRADNNLYQSVNNRWLSLAFYDLFQPFQSHAGLLEQQSPTIIVAPAQVLRALALAVMRGELHLTVKKVIS VAEVLDEQDRQLLQQVFGHVGEVYQATEGFLAASCSHGTLHLNEEFLHIEPQWIDERRFTPVITDFTRQTQPIVRYKLDD VLVVSDKPCPCGNPARAISHIEGRWDDQLLLPDPQGILQVIFADLCSRVLATALPLTADYRLIQRGDHHLHLMADCTASE LECCRRAMVLMLQQQGIETERLCWQLEAVAVIPQFDRKRRRIIRQGVAG
Specific function: Unknown
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41536; Mature: 41536
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKQLMMEHFDVMNTQGLHRDVLMACALGSEQDRDFSRQTGKFSVGLSSGTSGQRGLFVV CCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCCCCCCEEEE SPQEQQLWAGGILAKMLPDGVFAGERVALFLRADNNLYQSVNNRWLSLAFYDLFQPFQSH CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCCEEHHHHHHHHHHHHHH AGLLEQQSPTIIVAPAQVLRALALAVMRGELHLTVKKVISVAEVLDEQDRQLLQQVFGHV CCHHCCCCCEEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEVYQATEGFLAASCSHGTLHLNEEFLHIEPQWIDERRFTPVITDFTRQTQPIVRYKLDD HHHHHHHCCCEEECCCCCEEEECCCEEEECCCHHCCCCCCCHHHHHHHCCCCHHEEEECC VLVVSDKPCPCGNPARAISHIEGRWDDQLLLPDPQGILQVIFADLCSRVLATALPLTADY EEEECCCCCCCCCHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCH RLIQRGDHHLHLMADCTASELECCRRAMVLMLQQQGIETERLCWQLEAVAVIPQFDRKRR HHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCHHHHHH RIIRQGVAG HHHHHCCCC >Mature Secondary Structure MDKQLMMEHFDVMNTQGLHRDVLMACALGSEQDRDFSRQTGKFSVGLSSGTSGQRGLFVV CCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCCCCCCEEEE SPQEQQLWAGGILAKMLPDGVFAGERVALFLRADNNLYQSVNNRWLSLAFYDLFQPFQSH CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCCEEHHHHHHHHHHHHHH AGLLEQQSPTIIVAPAQVLRALALAVMRGELHLTVKKVISVAEVLDEQDRQLLQQVFGHV CCHHCCCCCEEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEVYQATEGFLAASCSHGTLHLNEEFLHIEPQWIDERRFTPVITDFTRQTQPIVRYKLDD HHHHHHHCCCEEECCCCCEEEECCCEEEECCCHHCCCCCCCHHHHHHHCCCCHHEEEECC VLVVSDKPCPCGNPARAISHIEGRWDDQLLLPDPQGILQVIFADLCSRVLATALPLTADY EEEECCCCCCCCCHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCH RLIQRGDHHLHLMADCTASELECCRRAMVLMLQQQGIETERLCWQLEAVAVIPQFDRKRR HHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCHHHHHH RIIRQGVAG HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA