| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126194
Identifier: 22126194
GI number: 22126194
Start: 2544649
End: 2544822
Strand: Direct
Name: 22126194
Synonym: y2309
Alternate gene names: NA
Gene position: 2544649-2544822 (Clockwise)
Preceding gene: 22126193
Following gene: 22126195
Centisome position: 55.31
GC content: 45.4
Gene sequence:
>174_bases ATGTCAGGCAACCGTCAGCCTGGTGACATGAAGCATCCGGTAAAATCACGTTATCGCCACCGACATAATCCCCCCTCTTT AATCGTGCCGATAACAAAGGAAATGGATGATGAAAAAGAAAATTCAACAGTATCTGCTTTGCACTGCTCTTACATTTGCC GGCTCAATGGCTAG
Upstream 100 bases:
>100_bases ATGACAGTGTATTTTTGCATACAGGTTTAAGAGGAGGATCTCCCTCCTCTTCTTCTTTCTTGCTTTACGCGACTGATCAA TCATCGCAATTCTGACAAAC
Downstream 100 bases:
>100_bases CATTGCTCACGCGCAGGATGCGGCGAAAAATAACACGAAGCAACCGTCTCGGGCGCAACAATTGATGGGGGATATCGCCC CCAAGATGGCGCAACTCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 56
Protein sequence:
>57_residues MSGNRQPGDMKHPVKSRYRHRHNPPSLIVPITKEMDDEKENSTVSALHCSYICRLNG
Sequences:
>Translated_57_residues MSGNRQPGDMKHPVKSRYRHRHNPPSLIVPITKEMDDEKENSTVSALHCSYICRLNG >Mature_56_residues SGNRQPGDMKHPVKSRYRHRHNPPSLIVPITKEMDDEKENSTVSALHCSYICRLNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6533; Mature: 6401
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGNRQPGDMKHPVKSRYRHRHNPPSLIVPITKEMDDEKENSTVSALHCSYICRLNG CCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEHEEEEEEEEECC >Mature Secondary Structure SGNRQPGDMKHPVKSRYRHRHNPPSLIVPITKEMDDEKENSTVSALHCSYICRLNG CCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEHEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA