| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126185
Identifier: 22126185
GI number: 22126185
Start: 2535896
End: 2536348
Strand: Reverse
Name: 22126185
Synonym: y2300
Alternate gene names: NA
Gene position: 2536348-2535896 (Counterclockwise)
Preceding gene: 22126186
Following gene: 22126181
Centisome position: 55.13
GC content: 40.84
Gene sequence:
>453_bases TTGCTGCAGCGTTGGATATTGAGCACAAATTTCCCTGTAAAAAATGAGGTTATTATGTCAGCGATTGAACAGTTATCTTA TTATCAAAAAAAATTGGCTTATGAAACAGACTCATGGGATCTGTATCTGGCATTAAAGAACAGCGAAAATGTCGTTGTGG TCGATGGACGCAGTAAAGAGGTGTACCAGAGGGAACATATTCCGGGAGCTATCAACCAGCCTCACAAAGAAATCTGTTTT AATAACACTGAAAAGTTAGATAAAACAAAAATATATATCTGCTACTGTGATGGTATTGGTTGTAATGCTTCTACCAAAAC CGCGATGAAATTGATGACGCTGGGCTTTCAGGTAAAAGAATTGTTGGGAGGTCTGGACTGGTGGAAACGCGATGGTTATT CCACTGAGGGTATCGAGGGGAAAGAAGGTACACCGATTTCCTGCGGTTGCTGA
Upstream 100 bases:
>100_bases GCTGGAGCATCATTGCAACATCATCATCATCCGGCATTGCCCCATGACTTTTGTCTGTATGCCGGCAAACTCGCCAGTTC CCGCCAAGCCGTTGAACAGA
Downstream 100 bases:
>100_bases GGATCCGGATATAGACCTGTCCTGATATAGGTTGACACTTTTTTGCCTTAAAACGCCTGATGAACTTCATCGGGCGTTTT GTATTTTAACGACAGATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Related Sulfurtransferase; Rhodanese-Like Protein; Rhodanese-Like Domain-Containing Protein; Rhodanese-Related Sulfurtransferase Protein; Rhodanese Sulfurtransferase; Transcriptional Regulator AraC Family; Rhodanese Domain Sulfurtransferase; Sulfurtransferase; Rhodanese Protein; Rhodanese-Like Sulfurtransferase
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MLQRWILSTNFPVKNEVIMSAIEQLSYYQKKLAYETDSWDLYLALKNSENVVVVDGRSKEVYQREHIPGAINQPHKEICF NNTEKLDKTKIYICYCDGIGCNASTKTAMKLMTLGFQVKELLGGLDWWKRDGYSTEGIEGKEGTPISCGC
Sequences:
>Translated_150_residues MLQRWILSTNFPVKNEVIMSAIEQLSYYQKKLAYETDSWDLYLALKNSENVVVVDGRSKEVYQREHIPGAINQPHKEICF NNTEKLDKTKIYICYCDGIGCNASTKTAMKLMTLGFQVKELLGGLDWWKRDGYSTEGIEGKEGTPISCGC >Mature_150_residues MLQRWILSTNFPVKNEVIMSAIEQLSYYQKKLAYETDSWDLYLALKNSENVVVVDGRSKEVYQREHIPGAINQPHKEICF NNTEKLDKTKIYICYCDGIGCNASTKTAMKLMTLGFQVKELLGGLDWWKRDGYSTEGIEGKEGTPISCGC
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17086; Mature: 17086
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQRWILSTNFPVKNEVIMSAIEQLSYYQKKLAYETDSWDLYLALKNSENVVVVDGRSKE CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCHH VYQREHIPGAINQPHKEICFNNTEKLDKTKIYICYCDGIGCNASTKTAMKLMTLGFQVKE HHHHHCCCCCCCCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCHHHHH LLGGLDWWKRDGYSTEGIEGKEGTPISCGC HHCCHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLQRWILSTNFPVKNEVIMSAIEQLSYYQKKLAYETDSWDLYLALKNSENVVVVDGRSKE CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCHH VYQREHIPGAINQPHKEICFNNTEKLDKTKIYICYCDGIGCNASTKTAMKLMTLGFQVKE HHHHHCCCCCCCCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCHHHHH LLGGLDWWKRDGYSTEGIEGKEGTPISCGC HHCCHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA