| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126083
Identifier: 22126083
GI number: 22126083
Start: 2429364
End: 2429705
Strand: Reverse
Name: 22126083
Synonym: y2196
Alternate gene names: NA
Gene position: 2429705-2429364 (Counterclockwise)
Preceding gene: 22126084
Following gene: 22126082
Centisome position: 52.81
GC content: 52.92
Gene sequence:
>342_bases ATGGCAATTGAAACATTTCTTTGGCGAACTCAGGGCGTTCCTGAGGGGAGCTTTAACCAGCGGGTCAGGACTGCTCAGTT CGGCGATGGCTACAAGCAGGTCACTGGTGACGGCATCAACCCTGAAACGCAGTCTTGGCCGCTGACATTCCAGGGCTTAG AAAAAGAGATGATGCCCATTCTGGCATTTGTTCGCAGACATACCACCAAGTCCTGCCAATGGACGGCCCCTTATGGTGTT GTGGGCCTGTGGCGTGTATCCGTTGACTCCATCAAGGCCGTACCCGTTGGTGGTAACGTTATGTCCGTCTCATTTACTTT CGAGCAGGCTTTTGCTCCGTAA
Upstream 100 bases:
>100_bases GAAATGAAGTCATAGCTATTGTTACCCAACAACTCGATCGCGCTATGGGGCAAAGTGGGCGCATCACCAATTTTGTCACT AACAGAGCGGGGCGTTAAGA
Downstream 100 bases:
>100_bases TTGAAGTAATGATGCTACAATAAATGCGTGGGATTCTGGAGAGATACTGGTGCCACTCTTTAGCGAGAGTGTGAAAGAAA GCGGAGGATAGCGACCTTCC
Product: phage tail protein
Products: NA
Alternate protein names: Prophage LambdaSo Minor Tail Protein M; Phage Minor Tail Protein; Prophage LambdaSo Protein; Phage Minor Tail; Phage Minor Tail Family Protein
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MAIETFLWRTQGVPEGSFNQRVRTAQFGDGYKQVTGDGINPETQSWPLTFQGLEKEMMPILAFVRRHTTKSCQWTAPYGV VGLWRVSVDSIKAVPVGGNVMSVSFTFEQAFAP
Sequences:
>Translated_113_residues MAIETFLWRTQGVPEGSFNQRVRTAQFGDGYKQVTGDGINPETQSWPLTFQGLEKEMMPILAFVRRHTTKSCQWTAPYGV VGLWRVSVDSIKAVPVGGNVMSVSFTFEQAFAP >Mature_112_residues AIETFLWRTQGVPEGSFNQRVRTAQFGDGYKQVTGDGINPETQSWPLTFQGLEKEMMPILAFVRRHTTKSCQWTAPYGVV GLWRVSVDSIKAVPVGGNVMSVSFTFEQAFAP
Specific function: Unknown
COG id: COG4718
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12603; Mature: 12471
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIETFLWRTQGVPEGSFNQRVRTAQFGDGYKQVTGDGINPETQSWPLTFQGLEKEMMPI CCCCCEEEECCCCCCCCCCCCEEECCCCCCCEEECCCCCCCCCCCCCEECCCCHHHHHHH LAFVRRHTTKSCQWTAPYGVVGLWRVSVDSIKAVPVGGNVMSVSFTFEQAFAP HHHHHHCCCCCCEEECCCCCEEEEEEECCCEEEEECCCCEEEEEEECCCCCCC >Mature Secondary Structure AIETFLWRTQGVPEGSFNQRVRTAQFGDGYKQVTGDGINPETQSWPLTFQGLEKEMMPI CCCCEEEECCCCCCCCCCCCEEECCCCCCCEEECCCCCCCCCCCCCEECCCCHHHHHHH LAFVRRHTTKSCQWTAPYGVVGLWRVSVDSIKAVPVGGNVMSVSFTFEQAFAP HHHHHHCCCCCCEEECCCCCEEEEEEECCCEEEEECCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA