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The map label for this gene is ydgA [H]

Identifier: 22125993

GI number: 22125993

Start: 2318370

End: 2319989

Strand: Reverse

Name: ydgA [H]

Synonym: y2104

Alternate gene names: 22125993

Gene position: 2319989-2318370 (Counterclockwise)

Preceding gene: 22125994

Following gene: 22125984

Centisome position: 50.43

GC content: 44.14

Gene sequence:

>1620_bases
GTGGGGCTTCTTAAATCACTCATTACCGCGTTCAATATAGTGAATTTGGTACATTGGAAAAGGATGAACAACACAATGAA
AAAATCGTTAGTGGCTGTCAGCGTCATTGTCGTACTCGGCGCAGCATGGACTGGAGCCTCTTGGTATACCGGTAAACTGA
TTGAACAACGCATGACCGAGCTGGTTGATAATGCCAACGGACAGATCAAGACAGCGTTTCCAAACGTGGGTGTCAAATTT
GCTTATAAAGATTACCAACGCGGTCTGTTCTCCAGTAAGGTCCGTTATATTTTACAATCAGATAATACTTTTACTGGCGA
AAAAGTATTGAGCGATGGTGATGAAATCGCCTTTATTGAAGTCATTGATCATGGCCCGTTCCCATTAGCTCAGTTGAAGA
AATTAAACCTAATTCCTAGCATGGCGTCAGTGCATACTGAGTTGGCTAACACGCCAGTGCTGAAGAAATTGTTTGATGTG
ACCAACGGCCAGTCGCCTTTTACTGCTGATTCGCGTATTTCTTACGGTGGCGATACCTCTTCTGCTATTACTTTCATTCC
AATCAACTATAAGCAAAATAGCACTAACGTGAAGTTCTCCGGTGCCACTATCAATGCCGATGTCTCTCGTGATATGCACA
ATGTAAGTATGAGCGGCAGCAGCGATAGTTTTATTTATTCCAAAAAGAATTATTTGGATCAAACAGAACAAGTCAGTGTG
CAAGGGCTAACGCTGAAAAGTGACAGTAAAGCGGGTAAGTTCGATATCAGCATTGGCGACCAACAGATTGGTGTTAAGCA
AATAGATATCAGCCATGAAGGCAAGAACATGGCGACATTGCTTGGCTTTAATCTGAAGACCCAATTGAGCGAAACTGATA
AAGATTTAAATGGCAAACTGAGCTATACCCTTGATGCTTTAAAAATTCAGGATAATAACTTTGGTTCAGCGCAATTGACT
ATTGCTTTTGACCGTTTCAACGGTGAGGGTCTGAAGCAGTTCATCAGTGCTTATAATAAGCGAGTACAGCTAGCTGAAAG
TGTTGATCAACTTGCCTCTCAGCAGCAAATGAGAGAAGTTGTCATGGCAAACCTTCCTGCGCTGCTGAAAGGTAACCCTG
CAGTGAGCATTGCCCCACTGAGCTGGAAAAATACTAAAGGGGAAAGTACCTTTACCCTGAATATCGAACTGACCGATCCG
ACACAAGCTAAATCAACAGAAAAACCACTAATAGCACCCGCGGTGAAAAAATTGGACGCCAACCTGAGCATTCCAATGGC
GATGGCTACAGAATTGGTCACTCAGGCCGCCCGCCTGCAAGGTTACAGCGAGGAAGAAGCGAAAAGTTCAGCACAGCAAC
AAGTCCAGAGTCTCGCTGCAATGGGCCAGATGTTTAGGCTGACCACCACTAAAGATGATGTAATCAGCAGTAAACTCCAG
TTTGCTGACAACCAAGTCGAATTGAATGGTCAGAAAATGTCACCAGAAGAATTTGCTGGCCTGTTTAATCTGCTTGGTGC
ACAGGGAGAAGAGGAGGAAGATATTGATAGCGGCCCTGAGTCACAAGAAACACCAGAATTTGACTTAGTCGTACCCGCAG
AGCCTGCTCCTGCACAATAA

Upstream 100 bases:

>100_bases
TTAAGTCTTTGTTACGGTCGCAATAATATTTGTGTATAGGTACTCTAGGCCTATATTATTTGGGAGATATATCTTCTTTT
TTGGGGATTTCCTTCTTTAG

Downstream 100 bases:

>100_bases
ACTATTCATTATATTTGTTTGATAAAAACGGAGCCCATTGGCTCCGTTTTAAATCTCTATTCTCTTTCCATCTCGATTCA
ATATAGATATATCCCCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MGLLKSLITAFNIVNLVHWKRMNNTMKKSLVAVSVIVVLGAAWTGASWYTGKLIEQRMTELVDNANGQIKTAFPNVGVKF
AYKDYQRGLFSSKVRYILQSDNTFTGEKVLSDGDEIAFIEVIDHGPFPLAQLKKLNLIPSMASVHTELANTPVLKKLFDV
TNGQSPFTADSRISYGGDTSSAITFIPINYKQNSTNVKFSGATINADVSRDMHNVSMSGSSDSFIYSKKNYLDQTEQVSV
QGLTLKSDSKAGKFDISIGDQQIGVKQIDISHEGKNMATLLGFNLKTQLSETDKDLNGKLSYTLDALKIQDNNFGSAQLT
IAFDRFNGEGLKQFISAYNKRVQLAESVDQLASQQQMREVVMANLPALLKGNPAVSIAPLSWKNTKGESTFTLNIELTDP
TQAKSTEKPLIAPAVKKLDANLSIPMAMATELVTQAARLQGYSEEEAKSSAQQQVQSLAAMGQMFRLTTTKDDVISSKLQ
FADNQVELNGQKMSPEEFAGLFNLLGAQGEEEEDIDSGPESQETPEFDLVVPAEPAPAQ

Sequences:

>Translated_539_residues
MGLLKSLITAFNIVNLVHWKRMNNTMKKSLVAVSVIVVLGAAWTGASWYTGKLIEQRMTELVDNANGQIKTAFPNVGVKF
AYKDYQRGLFSSKVRYILQSDNTFTGEKVLSDGDEIAFIEVIDHGPFPLAQLKKLNLIPSMASVHTELANTPVLKKLFDV
TNGQSPFTADSRISYGGDTSSAITFIPINYKQNSTNVKFSGATINADVSRDMHNVSMSGSSDSFIYSKKNYLDQTEQVSV
QGLTLKSDSKAGKFDISIGDQQIGVKQIDISHEGKNMATLLGFNLKTQLSETDKDLNGKLSYTLDALKIQDNNFGSAQLT
IAFDRFNGEGLKQFISAYNKRVQLAESVDQLASQQQMREVVMANLPALLKGNPAVSIAPLSWKNTKGESTFTLNIELTDP
TQAKSTEKPLIAPAVKKLDANLSIPMAMATELVTQAARLQGYSEEEAKSSAQQQVQSLAAMGQMFRLTTTKDDVISSKLQ
FADNQVELNGQKMSPEEFAGLFNLLGAQGEEEEDIDSGPESQETPEFDLVVPAEPAPAQ
>Mature_538_residues
GLLKSLITAFNIVNLVHWKRMNNTMKKSLVAVSVIVVLGAAWTGASWYTGKLIEQRMTELVDNANGQIKTAFPNVGVKFA
YKDYQRGLFSSKVRYILQSDNTFTGEKVLSDGDEIAFIEVIDHGPFPLAQLKKLNLIPSMASVHTELANTPVLKKLFDVT
NGQSPFTADSRISYGGDTSSAITFIPINYKQNSTNVKFSGATINADVSRDMHNVSMSGSSDSFIYSKKNYLDQTEQVSVQ
GLTLKSDSKAGKFDISIGDQQIGVKQIDISHEGKNMATLLGFNLKTQLSETDKDLNGKLSYTLDALKIQDNNFGSAQLTI
AFDRFNGEGLKQFISAYNKRVQLAESVDQLASQQQMREVVMANLPALLKGNPAVSIAPLSWKNTKGESTFTLNIELTDPT
QAKSTEKPLIAPAVKKLDANLSIPMAMATELVTQAARLQGYSEEEAKSSAQQQVQSLAAMGQMFRLTTTKDDVISSKLQF
ADNQVELNGQKMSPEEFAGLFNLLGAQGEEEEDIDSGPESQETPEFDLVVPAEPAPAQ

Specific function: Unknown

COG id: COG5339

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Periplasmic side. Note=Has been isolated in association with the inner membrane, suggesting it may be tethered to the membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yihF and H.influenzae HI_1236 [H]

Homologues:

Organism=Escherichia coli, GI1787900, Length=491, Percent_Identity=42.5661914460285, Blast_Score=403, Evalue=1e-113,
Organism=Escherichia coli, GI87082339, Length=486, Percent_Identity=27.9835390946502, Blast_Score=191, Evalue=7e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010352 [H]

Pfam domain/function: PF06097 DUF945 [H]

EC number: NA

Molecular weight: Translated: 58901; Mature: 58770

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLKSLITAFNIVNLVHWKRMNNTMKKSLVAVSVIVVLGAAWTGASWYTGKLIEQRMTE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LVDNANGQIKTAFPNVGVKFAYKDYQRGLFSSKVRYILQSDNTFTGEKVLSDGDEIAFIE
HHHCCCCEEEEECCCCCEEEEHHHHHCCHHHHHHHEEEECCCCCCCHHHHCCCCCEEEEE
VIDHGPFPLAQLKKLNLIPSMASVHTELANTPVLKKLFDVTNGQSPFTADSRISYGGDTS
EECCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCC
SAITFIPINYKQNSTNVKFSGATINADVSRDMHNVSMSGSSDSFIYSKKNYLDQTEQVSV
CEEEEEEEEECCCCCEEEEECEEEECHHHCCHHHEEECCCCCCEEEECHHHCCCCHHEEE
QGLTLKSDSKAGKFDISIGDQQIGVKQIDISHEGKNMATLLGFNLKTQLSETDKDLNGKL
EEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHCCCCCCCEE
SYTLDALKIQDNNFGSAQLTIAFDRFNGEGLKQFISAYNKRVQLAESVDQLASQQQMREV
EEEEEEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMANLPALLKGNPAVSIAPLSWKNTKGESTFTLNIELTDPTQAKSTEKPLIAPAVKKLDA
HHHCCCHHHCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHCC
NLSIPMAMATELVTQAARLQGYSEEEAKSSAQQQVQSLAAMGQMFRLTTTKDDVISSKLQ
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHH
FADNQVELNGQKMSPEEFAGLFNLLGAQGEEEEDIDSGPESQETPEFDLVVPAEPAPAQ
HCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
GLLKSLITAFNIVNLVHWKRMNNTMKKSLVAVSVIVVLGAAWTGASWYTGKLIEQRMTE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LVDNANGQIKTAFPNVGVKFAYKDYQRGLFSSKVRYILQSDNTFTGEKVLSDGDEIAFIE
HHHCCCCEEEEECCCCCEEEEHHHHHCCHHHHHHHEEEECCCCCCCHHHHCCCCCEEEEE
VIDHGPFPLAQLKKLNLIPSMASVHTELANTPVLKKLFDVTNGQSPFTADSRISYGGDTS
EECCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCC
SAITFIPINYKQNSTNVKFSGATINADVSRDMHNVSMSGSSDSFIYSKKNYLDQTEQVSV
CEEEEEEEEECCCCCEEEEECEEEECHHHCCHHHEEECCCCCCEEEECHHHCCCCHHEEE
QGLTLKSDSKAGKFDISIGDQQIGVKQIDISHEGKNMATLLGFNLKTQLSETDKDLNGKL
EEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHCCCCCCCEE
SYTLDALKIQDNNFGSAQLTIAFDRFNGEGLKQFISAYNKRVQLAESVDQLASQQQMREV
EEEEEEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMANLPALLKGNPAVSIAPLSWKNTKGESTFTLNIELTDPTQAKSTEKPLIAPAVKKLDA
HHHCCCHHHCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHCC
NLSIPMAMATELVTQAARLQGYSEEEAKSSAQQQVQSLAAMGQMFRLTTTKDDVISSKLQ
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHH
FADNQVELNGQKMSPEEFAGLFNLLGAQGEEEEDIDSGPESQETPEFDLVVPAEPAPAQ
HCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]