Click here to switch to the map view.

The map label for this gene is trpH [H]

Identifier: 22125942

GI number: 22125942

Start: 2260816

End: 2261751

Strand: Direct

Name: trpH [H]

Synonym: y2052

Alternate gene names: 22125942

Gene position: 2260816-2261751 (Clockwise)

Preceding gene: 22125935

Following gene: 22125943

Centisome position: 49.14

GC content: 51.82

Gene sequence:

>936_bases
ATGATTGTTTTGAGTGCTGAGCCAGCGTTACCGGATATGAAAGAACTCACTGACGCCACGACGTTATCTACTGCTTTTAC
GCTTTATGATCTACATAGCCATACAACGGCTTCCGATGGCACGTTGACGCCATCAGAGCTGGTGATCAGAGCGGCACAGA
TGCGTGTTGGGGTTCTGGCTATCACTGATCACGATACCACTGCTGGTTTGGCAGAAGCGGCGGCGGCGATTGAACAGCAT
CAATTAGCGCTACGATTGATCCCCGGTGTTGAGATTTCCACCCTATGGGAAAATCATGAGATCCACATTGTGGGCCTGGG
TATTGATGTTCAGCATGTGAGTCTCCGTACGTTACTTGAGGCACAGTCTGAGCACCGTTATCAGCGGGCCCAAGAGATCA
GCACCCGTCTGGAGAAAGCACGTATTGTGGGCGCATGGGAAGGGGCTAACCGGTTGGCAAACGGTGGGCAGGTGACCCGT
GGGCATTTTGCGCGTTATCTGGTTGAGTTAGGGCTGGCCAGCAATGTTGGTCAGGTGTTTAAAAAGTATTTAGCTAAAGG
CAAGACCGGTTATGTTCCTGCTCAGTGGTGTACAATAGAACAAGCTATTGATGCGATTAAGCAATCAGGTGGACAAGCGG
TATTGGCCCATCCTGGCCGTTATGATTTAACGGCAAAATGGTTAAAGCGTTTATTGGCCCATTTTGCTGAACATGGCGGG
GACGCGATGGAAGTTGCCCAGTGCCAACAAGCCCCTCACGAGCGGGCGCTACTGGGTCAATACGCACGCGATTATCATTT
ACTGGCATCCCAGGGGTCTGATTTCCATCAACCTTGTTCTTGGATTGAATTGGGTCGCAAATTGTGGCTGCCCGCTGGGG
TGGAACCGGTATGGCGAGATTGGCCTACAGAGCCAGCCATGCCGCTCGTACGTTGA

Upstream 100 bases:

>100_bases
TTAACGAACTCTTTTTTCATAATCCCATGGAAGTCAGATGTAAGATTGATTAACGTTCGCGTCTTGTAAGCGGGTATGAT
AGCCAACCCTATTTTACTGG

Downstream 100 bases:

>100_bases
ATAATGAGGTAGAATCATGAGTCAATTTTTTTATATCCACCCGGACAATCCACAGCCCCGCCTGATCAACCAATGTGTTG
ATGTTTTACGTAAGGGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MIVLSAEPALPDMKELTDATTLSTAFTLYDLHSHTTASDGTLTPSELVIRAAQMRVGVLAITDHDTTAGLAEAAAAIEQH
QLALRLIPGVEISTLWENHEIHIVGLGIDVQHVSLRTLLEAQSEHRYQRAQEISTRLEKARIVGAWEGANRLANGGQVTR
GHFARYLVELGLASNVGQVFKKYLAKGKTGYVPAQWCTIEQAIDAIKQSGGQAVLAHPGRYDLTAKWLKRLLAHFAEHGG
DAMEVAQCQQAPHERALLGQYARDYHLLASQGSDFHQPCSWIELGRKLWLPAGVEPVWRDWPTEPAMPLVR

Sequences:

>Translated_311_residues
MIVLSAEPALPDMKELTDATTLSTAFTLYDLHSHTTASDGTLTPSELVIRAAQMRVGVLAITDHDTTAGLAEAAAAIEQH
QLALRLIPGVEISTLWENHEIHIVGLGIDVQHVSLRTLLEAQSEHRYQRAQEISTRLEKARIVGAWEGANRLANGGQVTR
GHFARYLVELGLASNVGQVFKKYLAKGKTGYVPAQWCTIEQAIDAIKQSGGQAVLAHPGRYDLTAKWLKRLLAHFAEHGG
DAMEVAQCQQAPHERALLGQYARDYHLLASQGSDFHQPCSWIELGRKLWLPAGVEPVWRDWPTEPAMPLVR
>Mature_311_residues
MIVLSAEPALPDMKELTDATTLSTAFTLYDLHSHTTASDGTLTPSELVIRAAQMRVGVLAITDHDTTAGLAEAAAAIEQH
QLALRLIPGVEISTLWENHEIHIVGLGIDVQHVSLRTLLEAQSEHRYQRAQEISTRLEKARIVGAWEGANRLANGGQVTR
GHFARYLVELGLASNVGQVFKKYLAKGKTGYVPAQWCTIEQAIDAIKQSGGQAVLAHPGRYDLTAKWLKRLLAHFAEHGG
DAMEVAQCQQAPHERALLGQYARDYHLLASQGSDFHQPCSWIELGRKLWLPAGVEPVWRDWPTEPAMPLVR

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=275, Percent_Identity=72.7272727272727, Blast_Score=406, Evalue=1e-114,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 34247; Mature: 34247

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLSAEPALPDMKELTDATTLSTAFTLYDLHSHTTASDGTLTPSELVIRAAQMRVGVLA
CEEECCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHEEEEE
ITDHDTTAGLAEAAAAIEQHQLALRLIPGVEISTLWENHEIHIVGLGIDVQHVSLRTLLE
EECCCCHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHH
AQSEHRYQRAQEISTRLEKARIVGAWEGANRLANGGQVTRGHFARYLVELGLASNVGQVF
HHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHH
KKYLAKGKTGYVPAQWCTIEQAIDAIKQSGGQAVLAHPGRYDLTAKWLKRLLAHFAEHGG
HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCC
DAMEVAQCQQAPHERALLGQYARDYHLLASQGSDFHQPCSWIELGRKLWLPAGVEPVWRD
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHC
WPTEPAMPLVR
CCCCCCCCCCC
>Mature Secondary Structure
MIVLSAEPALPDMKELTDATTLSTAFTLYDLHSHTTASDGTLTPSELVIRAAQMRVGVLA
CEEECCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHEEEEE
ITDHDTTAGLAEAAAAIEQHQLALRLIPGVEISTLWENHEIHIVGLGIDVQHVSLRTLLE
EECCCCHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHH
AQSEHRYQRAQEISTRLEKARIVGAWEGANRLANGGQVTRGHFARYLVELGLASNVGQVF
HHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHH
KKYLAKGKTGYVPAQWCTIEQAIDAIKQSGGQAVLAHPGRYDLTAKWLKRLLAHFAEHGG
HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCC
DAMEVAQCQQAPHERALLGQYARDYHLLASQGSDFHQPCSWIELGRKLWLPAGVEPVWRD
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHC
WPTEPAMPLVR
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]