| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22125930
Identifier: 22125930
GI number: 22125930
Start: 2246451
End: 2247575
Strand: Reverse
Name: 22125930
Synonym: y2038
Alternate gene names: NA
Gene position: 2247575-2246451 (Counterclockwise)
Preceding gene: 22125931
Following gene: 22125928
Centisome position: 48.85
GC content: 50.13
Gene sequence:
>1125_bases ATGCTAACAAAGCTTACCGTCGAAACAGCGTTAAATGCAGAGCTTACCGAACACCTCGGGCACGAGAAAAATACCCCTAA ATCAGGCTCGAATACCCGCAACGGCTATTCGTCCAAAACACTGCTATGCGACGACGGCGAAATCGAGCTGAATACGCCAC GCGACCGCGAAAACACCTTTGAACCGCAGCTGATAAAGAAAAATCAGACGCGTATCACACAGATGGACAGCCAGATTTTG TCCCTGTACGCCAAAGGCATGACCACCCGCGAAATCGTCGCCACCTTCAAAGAGATGTATGACGCCGATGTGTCTCCCAC GCTGATATCTAAAGTCACCGATGCCGTAAAAGAGCAGGTTGCTGAATGGCAAAACCGCCAACTGGATGCTCTGTATCCCA TTGTTTATATGGACTGCATTGTCGTAAAAGTCCGCCAGAACGGTAGCGTGATAAACAAAGCAGTGTTCCTAGCGCTGGGC ATCAACACTGAAGGTCAGAAAGAGCTGCTGGGCATGTGGCTGGCAGAAAATGAAGGTGCGAAGTTCTGGCTAAGTGTGCT GACAGAGCTGAAAAATCGCGGTCTTCAGGACATTCTGATTGCCTGCGTGGATGGCCTGAAGGGGTTCCCGGATGCGATAA ACAGTGTTTATCCGCAGACTCACATCCAGCTGTGCATCATCCATATGGTACGCAACAGCCTGAAATATGTGTCATGGAAG GACTATAAAGCCGTCACCAGCGGTTTGAAAATGGTGTATCAGGCTCCGACAGAAGAGGCGGCGCTGATGGCGCTGGATAA GTTTGCGGAGGCCTGGGACGACAAATACCCGCAAATTAGCAAAAGTTGGCGTACGCACTGGGAAAATCTCAATACATTCT TCGGCTATCCGCCCGATATCCGCAAGGCTATCTACACCACGAATGCCATCGAATCGGTGAACAGCGTGATCCGTGCAGCC ATTAAAAAGCGCAAAGTGTTCCCGACAGACGACTCAGTGCGGAAGGTTGTTTATTTGGCGATCAAGGATGCATCAAAAAA ATGGAGTATGCCGATCCAGAACTGGCGGTTAGCGATGAGCCGTTTTATTATCGAGTTCGGTGACCGCCTGAGCGATCACC TTTAA
Upstream 100 bases:
>100_bases CGGAGACAGGCAAATTATGGACGAAAAGAAACTTAAAGCACTTGCGGCTGAACTGGCTAAAGGTCTTAAAACCGAAGCCG ACCTTAATGCATTTTCTCGT
Downstream 100 bases:
>100_bases TACGGTGGCAGTTACACAGAATTATGGACAGGCTCTTAATTCATTTCCATTTTGCCATCGAGCTTGAACACAATGGTAGT CACATAGTTTTTAGCAGCGA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MLTKLTVETALNAELTEHLGHEKNTPKSGSNTRNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRITQMDSQIL SLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALYPIVYMDCIVVKVRQNGSVINKAVFLALG INTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWK DYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAA IKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSDHL
Sequences:
>Translated_374_residues MLTKLTVETALNAELTEHLGHEKNTPKSGSNTRNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRITQMDSQIL SLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALYPIVYMDCIVVKVRQNGSVINKAVFLALG INTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWK DYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAA IKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSDHL >Mature_374_residues MLTKLTVETALNAELTEHLGHEKNTPKSGSNTRNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRITQMDSQIL SLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALYPIVYMDCIVVKVRQNGSVINKAVFLALG INTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWK DYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAA IKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSDHL
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 42625; Mature: 42625
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS01007 TRANSPOSASE_MUTATOR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTKLTVETALNAELTEHLGHEKNTPKSGSNTRNGYSSKTLLCDDGEIELNTPRDRENTF CCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCC EPQLIKKNQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQV CCHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AEWQNRQLDALYPIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGMWLAENEGA HHHHCCCHHHHHHHHHHHHHEEEECCCCCHHHHEEEEEECCCCCCHHHHHHHHHHCCCCH KFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWK HHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCH DYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDI HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHH RKAIYTTNAIESVNSVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEEEECCCCCCCCCHHHHHHHHH RFIIEFGDRLSDHL HHHHHHHHHHHCCC >Mature Secondary Structure MLTKLTVETALNAELTEHLGHEKNTPKSGSNTRNGYSSKTLLCDDGEIELNTPRDRENTF CCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCC EPQLIKKNQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQV CCHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AEWQNRQLDALYPIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGMWLAENEGA HHHHCCCHHHHHHHHHHHHHEEEECCCCCHHHHEEEEEECCCCCCHHHHHHHHHHCCCCH KFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWK HHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCH DYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDI HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHH RKAIYTTNAIESVNSVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEEEECCCCCCCCCHHHHHHHHH RFIIEFGDRLSDHL HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1849509; 1327271; 11481430; 11481432 [H]