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The map label for this gene is tnpA1 [H]

Identifier: 22125835

GI number: 22125835

Start: 2142104

End: 2142586

Strand: Reverse

Name: tnpA1 [H]

Synonym: y1943

Alternate gene names: 22125835

Gene position: 2142586-2142104 (Counterclockwise)

Preceding gene: 257168077

Following gene: 22125834

Centisome position: 46.57

GC content: 46.17

Gene sequence:

>483_bases
TTGCGGTCTGGCAACTGCAAATGTTCAACAAGAAATCAAAAGGGGGTCCCAATGAGGGATGAAAAGAGCTTAGCGCACAC
CCGATGGAACTGTAAATATCATATAGTTTTTGCGCCGAAGTACCGAAGGCAGGTGTTCTACAGGGAAAAACGCAGAGCGA
TTGGCAGTATTTTAAGAAAACTGTGCGAATGGAAAAACGTGAATATCCTGGAAGCAGAATACTGTGTGGATCACATCCAT
ATGCTTCTGGAGATCCCGCCCAAGATGAGTGTCTCGGGATTTATGGGGTACCTGAAGGGAAAGAGCAGTCTGATGCTTTA
TGAGCAGTTTGGCGATTTGAAGTTCAAATACCGTAACAGGGAGTTTTGGTGTCGAGGGTATTACGTTGATACGGTAGGGA
AAAACACGGCCAGGATACAAGAATGTAACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGG
TAG

Upstream 100 bases:

>100_bases
ATTTTTTTGTGCCCAGAAAACCCCCAGCTAGGCTGGGGGTTCAGTAAAGCTTTCAGCTTTGGGTCAGTTATAAAAACCCC
TTTTGATTTGTTAAAACAGT

Downstream 100 bases:

>100_bases
TCTGCTCTCCTGATTCAGGAGAGTTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATG
AGTAGCCGGGCGATTGCCAG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MRSGNCKCSTRNQKGVPMRDEKSLAHTRWNCKYHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKNVNILEAEYCVDHIH
MLLEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTARIQECNERCNSDPHPTPEIRSRG

Sequences:

>Translated_160_residues
MRSGNCKCSTRNQKGVPMRDEKSLAHTRWNCKYHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKNVNILEAEYCVDHIH
MLLEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTARIQECNERCNSDPHPTPEIRSRG
>Mature_160_residues
MRSGNCKCSTRNQKGVPMRDEKSLAHTRWNCKYHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKNVNILEAEYCVDHIH
MLLEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTARIQECNERCNSDPHPTPEIRSRG

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 17 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 19023; Mature: 19023

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSGNCKCSTRNQKGVPMRDEKSLAHTRWNCKYHIVFAPKYRRQVFYREKRRAIGSILRK
CCCCCCCCCCCCCCCCCCCCCCHHHHEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
LCEWKNVNILEAEYCVDHIHMLLEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKYRNR
HHCCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEECCC
EFWCRGYYVDTVGKNTARIQECNERCNSDPHPTPEIRSRG
EEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSGNCKCSTRNQKGVPMRDEKSLAHTRWNCKYHIVFAPKYRRQVFYREKRRAIGSILRK
CCCCCCCCCCCCCCCCCCCCCCHHHHEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
LCEWKNVNILEAEYCVDHIHMLLEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKYRNR
HHCCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEECCC
EFWCRGYYVDTVGKNTARIQECNERCNSDPHPTPEIRSRG
EEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]