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The map label for this gene is yebR [H]

Identifier: 22125758

GI number: 22125758

Start: 2058255

End: 2058773

Strand: Direct

Name: yebR [H]

Synonym: y1865

Alternate gene names: 22125758

Gene position: 2058255-2058773 (Clockwise)

Preceding gene: 22125748

Following gene: 22125759

Centisome position: 44.74

GC content: 45.09

Gene sequence:

>519_bases
TTGGTTTCTAACGGTCATCACATGAAAAAAACAGAATTCTACGCGGAATTAAAACGTGACTTATGTGCCTTAGTTGCAGG
TGAAACGAATTTTATTGCCACACTGGCCAATGCCAGTGCCTTGCTTTATGAACGCCTTGATGGCTTGAATTGGGCTGGTT
TCTACTTGGTCGATGGCAAACAACTTGTACTCGGGCCTTTTCAGGGAAAGATTGCATGTGTGCGTATTCCGGTAGGAAAA
GGGGTGTGTGGAACCGCAGTAGCAGAAAACCGCGTTCAGCGGGTAGGTAATGTGCATGCTTTCCCCGGTCATATTGCCTG
TGATGCAGCAAGTAACGCTGAAATTGTGCTGCCAATCACTGTAAAGGGGAAAGTTATCGGCATTTTGGATATTGATAGCA
TTGTTTATGATCGCTTTGATGAAGACGACGAATTGGGTTTAATCTCAGTTGTGGCGGGGCTTTGCGAGCATCTTGAGTTT
TGTGATAGTGCCAAATATGTCACAGAGACTGCAAGTTGA

Upstream 100 bases:

>100_bases
AGGTAACTCTTTTGCAACATTACAGAGGAATACCCTTGTCGCCAAGGGTATTTAATGATTATTTTATATAAGCCAAGCAT
TCATTGCCCTTGGCTATTCT

Downstream 100 bases:

>100_bases
TATACGGATAACGTGGCAATTGCTGATGGCGTCATTATAATGACGCCTGTTCATGCCTGCGCTGGTTGGCAAACCCGTTG
TAATCAGGAAATTTCATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MVSNGHHMKKTEFYAELKRDLCALVAGETNFIATLANASALLYERLDGLNWAGFYLVDGKQLVLGPFQGKIACVRIPVGK
GVCGTAVAENRVQRVGNVHAFPGHIACDAASNAEIVLPITVKGKVIGILDIDSIVYDRFDEDDELGLISVVAGLCEHLEF
CDSAKYVTETAS

Sequences:

>Translated_172_residues
MVSNGHHMKKTEFYAELKRDLCALVAGETNFIATLANASALLYERLDGLNWAGFYLVDGKQLVLGPFQGKIACVRIPVGK
GVCGTAVAENRVQRVGNVHAFPGHIACDAASNAEIVLPITVKGKVIGILDIDSIVYDRFDEDDELGLISVVAGLCEHLEF
CDSAKYVTETAS
>Mature_172_residues
MVSNGHHMKKTEFYAELKRDLCALVAGETNFIATLANASALLYERLDGLNWAGFYLVDGKQLVLGPFQGKIACVRIPVGK
GVCGTAVAENRVQRVGNVHAFPGHIACDAASNAEIVLPITVKGKVIGILDIDSIVYDRFDEDDELGLISVVAGLCEHLEF
CDSAKYVTETAS

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=164, Percent_Identity=65.8536585365854, Blast_Score=226, Evalue=9e-61,
Organism=Saccharomyces cerevisiae, GI6322781, Length=151, Percent_Identity=41.7218543046358, Blast_Score=123, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 18499; Mature: 18499

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSNGHHMKKTEFYAELKRDLCALVAGETNFIATLANASALLYERLDGLNWAGFYLVDGK
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCEEEEECCC
QLVLGPFQGKIACVRIPVGKGVCGTAVAENRVQRVGNVHAFPGHIACDAASNAEIVLPIT
EEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEE
VKGKVIGILDIDSIVYDRFDEDDELGLISVVAGLCEHLEFCDSAKYVTETAS
ECCEEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCC
>Mature Secondary Structure
MVSNGHHMKKTEFYAELKRDLCALVAGETNFIATLANASALLYERLDGLNWAGFYLVDGK
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCEEEEECCC
QLVLGPFQGKIACVRIPVGKGVCGTAVAENRVQRVGNVHAFPGHIACDAASNAEIVLPIT
EEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEE
VKGKVIGILDIDSIVYDRFDEDDELGLISVVAGLCEHLEFCDSAKYVTETAS
ECCEEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10493123 [H]