Click here to switch to the map view.

The map label for this gene is 22125754

Identifier: 22125754

GI number: 22125754

Start: 2052608

End: 2053150

Strand: Reverse

Name: 22125754

Synonym: y1861

Alternate gene names: NA

Gene position: 2053150-2052608 (Counterclockwise)

Preceding gene: 22125755

Following gene: 22125753

Centisome position: 44.63

GC content: 49.17

Gene sequence:

>543_bases
TTGGTAATAACAGTGAAAAATCACACTCTTGTTGTATTCAGTTTAAGTCTAGTGTGCGGTTTACTGCTATTCCAAGCATA
TCCAGTAAATGCAGTATCAAAAACAGCCAATATAACGGTAACGGCCACGCTACTGCCCACCTGCCTTGCGCGTTTTCTGG
TCAGTGGCAGCACAAGTTTTGGCACCTTGGATTTTGGATCAACTGTCGCGTTAACCCAACCAATCTCGGTGGCAGGTCAA
ACCAATAGTGGCGCTATCACCGTGCAATGCAGCAACGGTACCAGTTTTAACGTATTACTGAGCAGCGGACAGAGTGGCAA
TACCAATAACCGTTATCTGTCCGGGGGGCCATCAGCCCAGCAAGTGAGCTACAACCTGTATACCAACGCGACCTATAGTG
TCATCTGGGATGATGTGGTGGGTGTATCGCAGGTTGCTACCGGACAAGTCGTCACCATACCGGTTTATGGCCTGGTTCCT
GCACAATCGACGCCTGCGGTAGGGACCTATACTGATACCGTTCAGGTCACGGTGAGTTGGTAA

Upstream 100 bases:

>100_bases
GGATTGCCACGCCTATTCCTTTGACTATCTATGCTCAAGTCCCGATACAAACAACGCCCAGTGTCAGTACTTATATTGAT
ACTGTTATCGTTACTGTTAC

Downstream 100 bases:

>100_bases
GTATAGAGGGAGGGCTAACAATGATAAGTCTTTTTTCTCCATGTCACCTCAGTGCCGCTTTACTTATCTCAGCACTGTCT
ATCGTACCTACCAACGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide Protein; Spore Coat Protein U Domain Protein; Lipoprotein; Type 1 Pili Pilus Subunit; Spore Coat Protein U Family Protein; Type 1 Pili Subunit CsuA/B Protein; Spore Coat Protein U; Spore Coat Protein U Domain-Containing; Spore Coat U Domain Protein

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MVITVKNHTLVVFSLSLVCGLLLFQAYPVNAVSKTANITVTATLLPTCLARFLVSGSTSFGTLDFGSTVALTQPISVAGQ
TNSGAITVQCSNGTSFNVLLSSGQSGNTNNRYLSGGPSAQQVSYNLYTNATYSVIWDDVVGVSQVATGQVVTIPVYGLVP
AQSTPAVGTYTDTVQVTVSW

Sequences:

>Translated_180_residues
MVITVKNHTLVVFSLSLVCGLLLFQAYPVNAVSKTANITVTATLLPTCLARFLVSGSTSFGTLDFGSTVALTQPISVAGQ
TNSGAITVQCSNGTSFNVLLSSGQSGNTNNRYLSGGPSAQQVSYNLYTNATYSVIWDDVVGVSQVATGQVVTIPVYGLVP
AQSTPAVGTYTDTVQVTVSW
>Mature_180_residues
MVITVKNHTLVVFSLSLVCGLLLFQAYPVNAVSKTANITVTATLLPTCLARFLVSGSTSFGTLDFGSTVALTQPISVAGQ
TNSGAITVQCSNGTSFNVLLSSGQSGNTNNRYLSGGPSAQQVSYNLYTNATYSVIWDDVVGVSQVATGQVVTIPVYGLVP
AQSTPAVGTYTDTVQVTVSW

Specific function: Unknown

COG id: COG5430

COG function: function code S; Uncharacterized secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18681; Mature: 18681

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVITVKNHTLVVFSLSLVCGLLLFQAYPVNAVSKTANITVTATLLPTCLARFLVSGSTSF
CEEEEECCEEEEEEHHHHHHHHHHHCCCCCHHCCCCEEEEEEHHHHHHHHHHHHCCCCCC
GTLDFGSTVALTQPISVAGQTNSGAITVQCSNGTSFNVLLSSGQSGNTNNRYLSGGPSAQ
EEEECCCEEEEECCEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCHH
QVSYNLYTNATYSVIWDDVVGVSQVATGQVVTIPVYGLVPAQSTPAVGTYTDTVQVTVSW
EEEEEEEECCEEEEEECCCCCCCHHCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MVITVKNHTLVVFSLSLVCGLLLFQAYPVNAVSKTANITVTATLLPTCLARFLVSGSTSF
CEEEEECCEEEEEEHHHHHHHHHHHCCCCCHHCCCCEEEEEEHHHHHHHHHHHHCCCCCC
GTLDFGSTVALTQPISVAGQTNSGAITVQCSNGTSFNVLLSSGQSGNTNNRYLSGGPSAQ
EEEECCCEEEEECCEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCHH
QVSYNLYTNATYSVIWDDVVGVSQVATGQVVTIPVYGLVPAQSTPAVGTYTDTVQVTVSW
EEEEEEEECCEEEEEECCCCCCCHHCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA