Definition Yersinia pestis KIM 10 chromosome, complete genome.
Accession NC_004088
Length 4,600,755

Click here to switch to the map view.

The map label for this gene is 22125726

Identifier: 22125726

GI number: 22125726

Start: 2018116

End: 2018847

Strand: Direct

Name: 22125726

Synonym: y1833

Alternate gene names: NA

Gene position: 2018116-2018847 (Clockwise)

Preceding gene: 22125725

Following gene: 22125727

Centisome position: 43.86

GC content: 46.45

Gene sequence:

>732_bases
ATGTTGAAACATTTCAGACTGGGTCTTTTTACCGCAAATGTTCAGGCGGATACAGGGAGCCAACACTCCTTTAGCCGTGT
TCCAGCAGCCGCGATTAATCCCATAACATTAGCGATTGTTGTGGCGTTTTCTACTATTGCTTTACCACCAATGGCATTAG
CAGCATGCACCAGCCCCGGGGTGGGAACCTATGTCTGCGAAGGTGAAAATACCGACGGCATCATCCTGAGCGGCACGGAT
ATTGCGGTTGAGACCCAACCTGGTTTCAGCATAATAGTTCCTGAAAATGGAGACCCTGCACTCTCGCTAGTCGGTTCTGG
CACCATCAGCTACCTTGATACCAACAGTTCTGCGCTTGATACCACGGGTGCCGATTCTTTGTATATCCAGAATGATACGC
ACACCACTGGGCAATCGTCGTCCATTAATGTTCAGACAAACGGTTCAATGGGTAGCGGTATCAATATTAGCAACCATAGC
GGTGCCGACTCGACAGTACAGGTGGATGTTTCCGGCACATTATTTGGTGATCTAAATGGTTCTCCCGCCCTTTTAATCTA
TTCATCGGCGGAGAATAATTCCACTATTCTCATGAATATCAATACTATTTTCGGCGACGTGGGTATTCGAAGCGATAACA
CTTCATTCAATGGAACAGCCATCACTAACGTTGATATTGCTAATGATATTAATGCTACATATTCGGGTGCCACTATCAAA
CAACAGCGGTAG

Upstream 100 bases:

>100_bases
TCAACTCTTTGCTGACAATATTTAGTGAGAAGGAGAGAAAATATTTTTCAGGCGATATGTCGTATCGGTAATAAACTGGG
GCAGCTAATAGGGTAATTCT

Downstream 100 bases:

>100_bases
CGGCGGTACCAGTGTGGTTAATTTCAACTCAAAAAGCATCATTACAGAATTGGACGCCTTAAATATTTATAATACCAATT
ATTCAGGGGCGGTTATAACC

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Autotransporter

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MLKHFRLGLFTANVQADTGSQHSFSRVPAAAINPITLAIVVAFSTIALPPMALAACTSPGVGTYVCEGENTDGIILSGTD
IAVETQPGFSIIVPENGDPALSLVGSGTISYLDTNSSALDTTGADSLYIQNDTHTTGQSSSINVQTNGSMGSGINISNHS
GADSTVQVDVSGTLFGDLNGSPALLIYSSAENNSTILMNINTIFGDVGIRSDNTSFNGTAITNVDIANDINATYSGATIK
QQR

Sequences:

>Translated_243_residues
MLKHFRLGLFTANVQADTGSQHSFSRVPAAAINPITLAIVVAFSTIALPPMALAACTSPGVGTYVCEGENTDGIILSGTD
IAVETQPGFSIIVPENGDPALSLVGSGTISYLDTNSSALDTTGADSLYIQNDTHTTGQSSSINVQTNGSMGSGINISNHS
GADSTVQVDVSGTLFGDLNGSPALLIYSSAENNSTILMNINTIFGDVGIRSDNTSFNGTAITNVDIANDINATYSGATIK
QQR
>Mature_243_residues
MLKHFRLGLFTANVQADTGSQHSFSRVPAAAINPITLAIVVAFSTIALPPMALAACTSPGVGTYVCEGENTDGIILSGTD
IAVETQPGFSIIVPENGDPALSLVGSGTISYLDTNSSALDTTGADSLYIQNDTHTTGQSSSINVQTNGSMGSGINISNHS
GADSTVQVDVSGTLFGDLNGSPALLIYSSAENNSTILMNINTIFGDVGIRSDNTSFNGTAITNVDIANDINATYSGATIK
QQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24954; Mature: 24954

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKHFRLGLFTANVQADTGSQHSFSRVPAAAINPITLAIVVAFSTIALPPMALAACTSPG
CCCEEEEEEEEEEEECCCCCCCCHHCCCHHHCCHHHEEEEEHHHHHCCCCHHEEHHCCCC
VGTYVCEGENTDGIILSGTDIAVETQPGFSIIVPENGDPALSLVGSGTISYLDTNSSALD
CEEEEECCCCCCEEEEECCEEEEEECCCEEEEEECCCCCEEEEEECCEEEEEECCCCCCC
TTGADSLYIQNDTHTTGQSSSINVQTNGSMGSGINISNHSGADSTVQVDVSGTLFGDLNG
CCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCEEEEEEEEEEEECCCC
SPALLIYSSAENNSTILMNINTIFGDVGIRSDNTSFNGTAITNVDIANDINATYSGATIK
CCEEEEEECCCCCCEEEEEEHHEEEEEEECCCCCCCCCEEEEEEEECCCCCCEECCEEEE
QQR
CCC
>Mature Secondary Structure
MLKHFRLGLFTANVQADTGSQHSFSRVPAAAINPITLAIVVAFSTIALPPMALAACTSPG
CCCEEEEEEEEEEEECCCCCCCCHHCCCHHHCCHHHEEEEEHHHHHCCCCHHEEHHCCCC
VGTYVCEGENTDGIILSGTDIAVETQPGFSIIVPENGDPALSLVGSGTISYLDTNSSALD
CEEEEECCCCCCEEEEECCEEEEEECCCEEEEEECCCCCEEEEEECCEEEEEECCCCCCC
TTGADSLYIQNDTHTTGQSSSINVQTNGSMGSGINISNHSGADSTVQVDVSGTLFGDLNG
CCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCEEEEEEEEEEEECCCC
SPALLIYSSAENNSTILMNINTIFGDVGIRSDNTSFNGTAITNVDIANDINATYSGATIK
CCEEEEEECCCCCCEEEEEEHHEEEEEEECCCCCCCCCEEEEEEEECCCCCCEECCEEEE
QQR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA