| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22125598
Identifier: 22125598
GI number: 22125598
Start: 1886965
End: 1887357
Strand: Direct
Name: 22125598
Synonym: y1704
Alternate gene names: NA
Gene position: 1886965-1887357 (Clockwise)
Preceding gene: 22125597
Following gene: 22125599
Centisome position: 41.01
GC content: 45.04
Gene sequence:
>393_bases GTGATTGGCAGCACGGCGACGGCCGATAAAAACACGCTGGATACCGGGACACTGGGCTTCAGTGATATCGATAATCAAGC CGATTTCAAGGTTGAACATCAAAGTGTCGGTATCAGTACCGGGGGGAATATCGGCAGTCAGTTTGTTGGCAATATGGCCA ACGGCTTGCTGGTCGGGGCCAATAACGAAGGCCACGCCGACAGCACCACCCATGCGGCCGTTTCTGAAGGTATGAGAGCG GCTCTTTTAGATATCAGGGTTTTTATGATGTCTATTTATGGGGTTTTTTATCAATCAGTTGAAGATATTGACTTTTTTAT CAGAGAGACAAAAGAATTTTCTTTCCCTGAAGACTATCAAGTTCCTGAACATTATAACTATCGTAGAGAATAA
Upstream 100 bases:
>100_bases TCACAGGAAGAGAAGTACCAGAACGCGCAGATACAGGTCGTTGCCGCCGCTGAGGAGTACAAGGGGCAAAACTGTACAGG GTACCCAGCTTGACGGTGCG
Downstream 100 bases:
>100_bases TGCGCTGGGTCTGGCTCTCAAGGGATGTGGTATCGCTGCACCCTGCCGAAGTCTGATAGCGAAGCAAGTTCTGGAGTTCG GTGTTAAAGCGGGTATTACG
Product: hypothetical protein
Products: NA
Alternate protein names: Adhesin/Hemagglutinin; Filamentous Haemagglutinin Outer Membrane Protein; Hemolysin; ShlA/HecA/FhaA Exofamily Protein; Adhesin/Hemagglutinin/Hemolysin; Hemolysin/Hemagglutinin-Like Protein; Filamentous Haemagglutinin; Contact-Dependent Inhibitor A; Haemolysin/Haemagglutinin; Adhesin/Haemagluttinin; Filamentous Haemagglutinin Family Protein; Adhesin/Hemolysin; Hemagglutinin-Related Protein; Adhesin; Contact-Dependent Inhibition Of Growth Factor CdiA; Hemagglutinin/Adhesin Repeat-Containing Protein
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MIGSTATADKNTLDTGTLGFSDIDNQADFKVEHQSVGISTGGNIGSQFVGNMANGLLVGANNEGHADSTTHAAVSEGMRA ALLDIRVFMMSIYGVFYQSVEDIDFFIRETKEFSFPEDYQVPEHYNYRRE
Sequences:
>Translated_130_residues MIGSTATADKNTLDTGTLGFSDIDNQADFKVEHQSVGISTGGNIGSQFVGNMANGLLVGANNEGHADSTTHAAVSEGMRA ALLDIRVFMMSIYGVFYQSVEDIDFFIRETKEFSFPEDYQVPEHYNYRRE >Mature_130_residues MIGSTATADKNTLDTGTLGFSDIDNQADFKVEHQSVGISTGGNIGSQFVGNMANGLLVGANNEGHADSTTHAAVSEGMRA ALLDIRVFMMSIYGVFYQSVEDIDFFIRETKEFSFPEDYQVPEHYNYRRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14299; Mature: 14299
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGSTATADKNTLDTGTLGFSDIDNQADFKVEHQSVGISTGGNIGSQFVGNMANGLLVGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEECCCCCCCCHHHHHHHHCCCEEEEC NNEGHADSTTHAAVSEGMRAALLDIRVFMMSIYGVFYQSVEDIDFFIRETKEFSFPEDYQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VPEHYNYRRE CCCCCCCCCC >Mature Secondary Structure MIGSTATADKNTLDTGTLGFSDIDNQADFKVEHQSVGISTGGNIGSQFVGNMANGLLVGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEECCCCCCCCHHHHHHHHCCCEEEEC NNEGHADSTTHAAVSEGMRAALLDIRVFMMSIYGVFYQSVEDIDFFIRETKEFSFPEDYQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VPEHYNYRRE CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA