| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22125512
Identifier: 22125512
GI number: 22125512
Start: 1786372
End: 1786584
Strand: Reverse
Name: 22125512
Synonym: y1617
Alternate gene names: NA
Gene position: 1786584-1786372 (Counterclockwise)
Preceding gene: 22125513
Following gene: 22125510
Centisome position: 38.83
GC content: 43.66
Gene sequence:
>213_bases TTGATGATGGAAATCAGCATCAAAAGTATCCTGAAAGAATTAGCCGTCAGTGCTGAAGTCGATCATGTTGACCTCGGTTC CGCAAAAGGTACGCCAAGCGATATCTTTATCGGTACCAAAGACATTGCAGAGCAATTAGTTGCTCAAGCAGTGGGTGGCA AAATCGTTGCATTGGATAACATGATCGATAAGAAAGCCAGAGCCTGTCCATAA
Upstream 100 bases:
>100_bases AACGAAGGAAGCCAACGCATCTGCAACTTGCAAGATAACGAGTAAAAAAGGAAAGAAAATGAAAATTACAGTGGTCTGTG GTAACGGTTTAGGAACCAGT
Downstream 100 bases:
>100_bases TTCTGTGTAACTGCCACCGTATTAAAGGTGATCGCTCAGGCGGTCACCGAACTCGATAATAAAACGGCTCATCGCTAACC GCCAGTTCTGGATCGGCATA
Product: hypothetical protein
Products: NA
Alternate protein names: PTS Sysytem Mannitol-Specific II B Component; Phosphotransferase II B Component; PTS System Specific IIB Component; PTS System Transporter Subunit EIIB
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MMMEISIKSILKELAVSAEVDHVDLGSAKGTPSDIFIGTKDIAEQLVAQAVGGKIVALDNMIDKKARACP
Sequences:
>Translated_70_residues MMMEISIKSILKELAVSAEVDHVDLGSAKGTPSDIFIGTKDIAEQLVAQAVGGKIVALDNMIDKKARACP >Mature_70_residues MMMEISIKSILKELAVSAEVDHVDLGSAKGTPSDIFIGTKDIAEQLVAQAVGGKIVALDNMIDKKARACP
Specific function: Unknown
COG id: COG3414
COG function: function code G; Phosphotransferase system, galactitol-specific IIB component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7384; Mature: 7384
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMEISIKSILKELAVSAEVDHVDLGSAKGTPSDIFIGTKDIAEQLVAQAVGGKIVALDN CCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCEEEEHHH MIDKKARACP HHHHHCCCCC >Mature Secondary Structure MMMEISIKSILKELAVSAEVDHVDLGSAKGTPSDIFIGTKDIAEQLVAQAVGGKIVALDN CCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCEEEEHHH MIDKKARACP HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA