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The map label for this gene is yfcH [H]

Identifier: 22125506

GI number: 22125506

Start: 1780130

End: 1781044

Strand: Reverse

Name: yfcH [H]

Synonym: y1611

Alternate gene names: 22125506

Gene position: 1781044-1780130 (Counterclockwise)

Preceding gene: 22125510

Following gene: 22125490

Centisome position: 38.71

GC content: 53.66

Gene sequence:

>915_bases
TTGGCTATGCGTATTTTAATCACCGGTGCTACAGGGTTGATCGGGCGCAGCCTGACCCCCTTTCTTCTGTCGCAAGGCCA
CCAAATAACGGCCCTGACCCGCTCACTGCAGCGGGCCAATAACCTGCTCGGTCAGCAAGTGACCTACTGGCCCACTCTGG
ATGATCAAGAGGATCTCAACAGTTTTGATGCCGTGATCAATCTGGCCGGAGAGCCTATCGCCGAGAAACGCTGGACCTCG
CAGCAAAAAGAGATCCTCTGCCAAAGCCGCTGGCAAATAACTGAACGCTTAGCCACGCTGATCAATGCCAGCAGCCAGCC
ACCAACCGTTTTTATTTCCGGTTCTGCGGTTGGATTTTATGGCGACCAAGGGCAGGCATTAGTCACCGAAGAAGAGCCTC
CCCACGACGAGTTTACCCATCAATTATGTGAGCGTTGGGAAAATCTGGCACTGGCGGCGGAGAGTAGCCATACCCGAGTC
TGCTTGCTGCGTACCGGCGTCGTATTAGCGCCAGAAGGCGGCGCGCTAGCCAAGATGCTTCCTCTATTCCGCCTTGGATT
AGGTGGCCCCATGGGGGATGGTCGCCAATATCTGCCTTGGATACATCTCGAGGATATGGTGCAGGGTATTTATTATCTGC
TAACCACCCATAATCTGCGCGGCCCGTTTAATATGGTTGCCCCCTATCCGGTCCACAATGAGCAATTTACGGCGACGCTG
GCCGATGTTTTGGATCGCCCAGCAGCCATCCGCACACCTGCAGCGGCCATTCGTCTATTAATGGGTGAATCCGCAATATT
GGTGCTCGGTGGGCAACGGGCGTTACCGAAACGATTAGAAGAGGCGGGGTTTGGCTTTCGCTATTATGAATTGGAAGATG
CACTGCGTGATGTACTGAAAAAACCAAAGGAATAA

Upstream 100 bases:

>100_bases
TGCTCAGTGTCGTGGGATAAGAGCACAGAATCGCCTATGCTAAAAGAGAAAAAGAAATAGATGAGGTTGATGACTTGATA
GGATTGGATTTAAATGGAGA

Downstream 100 bases:

>100_bases
GCCGCTGGCGTTCCCTAATAGGGGTGAGGGGTGAACCGTGAAATGGTATTCACCCCCCTAAAATACAGCTATCCATTAAT
ACAACTATCCATTAGCCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MAMRILITGATGLIGRSLTPFLLSQGHQITALTRSLQRANNLLGQQVTYWPTLDDQEDLNSFDAVINLAGEPIAEKRWTS
QQKEILCQSRWQITERLATLINASSQPPTVFISGSAVGFYGDQGQALVTEEEPPHDEFTHQLCERWENLALAAESSHTRV
CLLRTGVVLAPEGGALAKMLPLFRLGLGGPMGDGRQYLPWIHLEDMVQGIYYLLTTHNLRGPFNMVAPYPVHNEQFTATL
ADVLDRPAAIRTPAAAIRLLMGESAILVLGGQRALPKRLEEAGFGFRYYELEDALRDVLKKPKE

Sequences:

>Translated_304_residues
MAMRILITGATGLIGRSLTPFLLSQGHQITALTRSLQRANNLLGQQVTYWPTLDDQEDLNSFDAVINLAGEPIAEKRWTS
QQKEILCQSRWQITERLATLINASSQPPTVFISGSAVGFYGDQGQALVTEEEPPHDEFTHQLCERWENLALAAESSHTRV
CLLRTGVVLAPEGGALAKMLPLFRLGLGGPMGDGRQYLPWIHLEDMVQGIYYLLTTHNLRGPFNMVAPYPVHNEQFTATL
ADVLDRPAAIRTPAAAIRLLMGESAILVLGGQRALPKRLEEAGFGFRYYELEDALRDVLKKPKE
>Mature_303_residues
AMRILITGATGLIGRSLTPFLLSQGHQITALTRSLQRANNLLGQQVTYWPTLDDQEDLNSFDAVINLAGEPIAEKRWTSQ
QKEILCQSRWQITERLATLINASSQPPTVFISGSAVGFYGDQGQALVTEEEPPHDEFTHQLCERWENLALAAESSHTRVC
LLRTGVVLAPEGGALAKMLPLFRLGLGGPMGDGRQYLPWIHLEDMVQGIYYLLTTHNLRGPFNMVAPYPVHNEQFTATLA
DVLDRPAAIRTPAAAIRLLMGESAILVLGGQRALPKRLEEAGFGFRYYELEDALRDVLKKPKE

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=301, Percent_Identity=35.8803986710963, Blast_Score=174, Evalue=8e-44,
Organism=Escherichia coli, GI1788642, Length=298, Percent_Identity=68.7919463087248, Blast_Score=427, Evalue=1e-121,
Organism=Drosophila melanogaster, GI28573846, Length=305, Percent_Identity=29.8360655737705, Blast_Score=146, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33702; Mature: 33571

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMRILITGATGLIGRSLTPFLLSQGHQITALTRSLQRANNLLGQQVTYWPTLDDQEDLN
CEEEEEEECCCHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHH
SFDAVINLAGEPIAEKRWTSQQKEILCQSRWQITERLATLINASSQPPTVFISGSAVGFY
HHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEE
GDQGQALVTEEEPPHDEFTHQLCERWENLALAAESSHTRVCLLRTGVVLAPEGGALAKML
CCCCCEEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCEEEECCCCHHHHHH
PLFRLGLGGPMGDGRQYLPWIHLEDMVQGIYYLLTTHNLRGPFNMVAPYPVHNEQFTATL
HHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
ADVLDRPAAIRTPAAAIRLLMGESAILVLGGQRALPKRLEEAGFGFRYYELEDALRDVLK
HHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEEHHHHHHHHHHH
KPKE
CCCC
>Mature Secondary Structure 
AMRILITGATGLIGRSLTPFLLSQGHQITALTRSLQRANNLLGQQVTYWPTLDDQEDLN
EEEEEEECCCHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHH
SFDAVINLAGEPIAEKRWTSQQKEILCQSRWQITERLATLINASSQPPTVFISGSAVGFY
HHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEE
GDQGQALVTEEEPPHDEFTHQLCERWENLALAAESSHTRVCLLRTGVVLAPEGGALAKML
CCCCCEEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCEEEECCCCHHHHHH
PLFRLGLGGPMGDGRQYLPWIHLEDMVQGIYYLLTTHNLRGPFNMVAPYPVHNEQFTATL
HHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
ADVLDRPAAIRTPAAAIRLLMGESAILVLGGQRALPKRLEEAGFGFRYYELEDALRDVLK
HHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEEHHHHHHHHHHH
KPKE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]