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The map label for this gene is ygeA [H]

Identifier: 22125487

GI number: 22125487

Start: 1760032

End: 1760862

Strand: Reverse

Name: ygeA [H]

Synonym: y1592

Alternate gene names: 22125487

Gene position: 1760862-1760032 (Counterclockwise)

Preceding gene: 22125489

Following gene: 161484835

Centisome position: 38.27

GC content: 47.65

Gene sequence:

>831_bases
TTGCCGAAAGGCAGTAAGCGAAAGACAAATCGGTGTACGATGGCTTTCACTTATAACGTGGGGGCGCTGTCGCCCTTCAA
GATGCAGGGAGTTAGCTGCCCTTGCTCACCCCAGTCACTGAGTGATGGAATAATAATGATGAAAATTTTAGGTCTTATTG
GTGGCATGAGTTGGGAATCAACCATTCCCTATTACAGAATGATTAACCAGCACGTTAAAGCACAATTAGGCGGCTTACAC
AGCGCTAAAATTATTCTCTACAGTGTGGACTTTCATGAGATTGAACAGCTTCAGGCAAAAGGTGACTGGCAAACAGCCGC
TCAATTACTCTCTAATGCCGCTATCTCATTAAAACATGCTGGCGCGGAGGTTATCGTGGTGTGCACCAATACCATGCACA
AAGTGGCCGATGATATTGAAGCAGCCTGCGGGTTGCCCTTACTGCACATTGCTGATGCCACTGCCGTCCAAATTAAACAA
CAAGGAATAGATAAGATCGGTCTATTAGGGACCCGCTATACCATGGAGCAAGGCTTTTACCGTGGCCGTTTAACAGAAAA
ACACGGCATTGAGGTTATCACTCCAGACGATACAGACCGAGAGGCAGTTAACCGCATTATTTATGAAGAGCTCTGCTTGG
GGATCATCAGTGAAACCTCCCGGGATGCCTATCGCCGGGTGATAAAGAAACTCGAAGCACAGGGTGTGCAAGGGATTATT
TTTGGGTGTACCGAAATCACGCTACTGGTTAACGCGCAAGATGCCTCAGTACCGGTGTTTGATACCACAGCGATACATGC
CAGCGCCGCGGCTGATTACGCACTGCAATAA

Upstream 100 bases:

>100_bases
CCTACACATCAAATATGAATAGGGCGAGTTATTTGTGGGAATTTTCTTAATTTTCCACGATGACATCTCATAATACCGTT
TATACCCAAGTGACTCCGAG

Downstream 100 bases:

>100_bases
TTAAGCATGTCACTCACAATAAAAGAAGAGGCCCGCAACCCTGTGACTCACCATAGTGAAAAAACCTATGTTGTGAATAA
AACGTTTGGTCGAAAATAAA

Product: resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MPKGSKRKTNRCTMAFTYNVGALSPFKMQGVSCPCSPQSLSDGIIMMKILGLIGGMSWESTIPYYRMINQHVKAQLGGLH
SAKIILYSVDFHEIEQLQAKGDWQTAAQLLSNAAISLKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADATAVQIKQ
QGIDKIGLLGTRYTMEQGFYRGRLTEKHGIEVITPDDTDREAVNRIIYEELCLGIISETSRDAYRRVIKKLEAQGVQGII
FGCTEITLLVNAQDASVPVFDTTAIHASAAADYALQ

Sequences:

>Translated_276_residues
MPKGSKRKTNRCTMAFTYNVGALSPFKMQGVSCPCSPQSLSDGIIMMKILGLIGGMSWESTIPYYRMINQHVKAQLGGLH
SAKIILYSVDFHEIEQLQAKGDWQTAAQLLSNAAISLKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADATAVQIKQ
QGIDKIGLLGTRYTMEQGFYRGRLTEKHGIEVITPDDTDREAVNRIIYEELCLGIISETSRDAYRRVIKKLEAQGVQGII
FGCTEITLLVNAQDASVPVFDTTAIHASAAADYALQ
>Mature_275_residues
PKGSKRKTNRCTMAFTYNVGALSPFKMQGVSCPCSPQSLSDGIIMMKILGLIGGMSWESTIPYYRMINQHVKAQLGGLHS
AKIILYSVDFHEIEQLQAKGDWQTAAQLLSNAAISLKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADATAVQIKQQ
GIDKIGLLGTRYTMEQGFYRGRLTEKHGIEVITPDDTDREAVNRIIYEELCLGIISETSRDAYRRVIKKLEAQGVQGIIF
GCTEITLLVNAQDASVPVFDTTAIHASAAADYALQ

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=229, Percent_Identity=58.5152838427948, Blast_Score=287, Evalue=6e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: NA

Molecular weight: Translated: 30130; Mature: 29999

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS00923 ASP_GLU_RACEMASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKGSKRKTNRCTMAFTYNVGALSPFKMQGVSCPCSPQSLSDGIIMMKILGLIGGMSWES
CCCCCCCCCCEEEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
TIPYYRMINQHVKAQLGGLHSAKIILYSVDFHEIEQLQAKGDWQTAAQLLSNAAISLKHA
CCHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHCCCCHHHHHHHHHCCCEEEEEC
GAEVIVVCTNTMHKVADDIEAACGLPLLHIADATAVQIKQQGIDKIGLLGTRYTMEQGFY
CCEEEEEECCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCHHHCCCCHHHHHCCCC
RGRLTEKHGIEVITPDDTDREAVNRIIYEELCLGIISETSRDAYRRVIKKLEAQGVQGII
CCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEE
FGCTEITLLVNAQDASVPVFDTTAIHASAAADYALQ
EEEEEEEEEEECCCCCCCEEECHHHHHHHHHHHCCC
>Mature Secondary Structure 
PKGSKRKTNRCTMAFTYNVGALSPFKMQGVSCPCSPQSLSDGIIMMKILGLIGGMSWES
CCCCCCCCCEEEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
TIPYYRMINQHVKAQLGGLHSAKIILYSVDFHEIEQLQAKGDWQTAAQLLSNAAISLKHA
CCHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHCCCCHHHHHHHHHCCCEEEEEC
GAEVIVVCTNTMHKVADDIEAACGLPLLHIADATAVQIKQQGIDKIGLLGTRYTMEQGFY
CCEEEEEECCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCHHHCCCCHHHHHCCCC
RGRLTEKHGIEVITPDDTDREAVNRIIYEELCLGIISETSRDAYRRVIKKLEAQGVQGII
CCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEE
FGCTEITLLVNAQDASVPVFDTTAIHASAAADYALQ
EEEEEEEEEEECCCCCCCEEECHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]