| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22125461
Identifier: 22125461
GI number: 22125461
Start: 1734091
End: 1734597
Strand: Direct
Name: 22125461
Synonym: y1566
Alternate gene names: NA
Gene position: 1734091-1734597 (Clockwise)
Preceding gene: 22125457
Following gene: 22125462
Centisome position: 37.69
GC content: 35.9
Gene sequence:
>507_bases ATGACGGGGTCTTGGCAAAAAATAAGACAAGGAATGATGATGAGTTTAATAAAATCCACCCTAATTTTTGGGGTATTGTT GGTGGTTTCGTTTGGTACTTTAGCTATGTCTGATGAGTGTAAGCAAGCATACGGTATCTTTGACGATGCCGCTTATTTTT CAGGTAAAATGAACGTGAAACCAGGCGATGGTAAAGAAGTTACAAAAACAAATGTCAATGTCGAAGCTTTTAATGAATGG TATTACCGTTCATATGATGATGAGTGGATGGCTGTACTAGAAAAATATACAAAATTTAAGGGCGTGGATGATGATAGTGT CATAGGAATTTCTTTGCTCGCATTTATCGAAACGTCAGGTTTAGTGGAGTTTTATAAAAGCTATATAGACTTCCTAACTG ATTTCCCTAAAAGAACAGATACTTATCTTGTTAGTGGTCGAGTAGAAGCTGCAAAGAAAAAAATTGATGATGCCTATAAA GAACTCGTCGGCCATTGTAATAAATAA
Upstream 100 bases:
>100_bases TATAGCATGTTGTATAACGCGAGGTGCTTACGGCACGCTCCTTGGCGGTGGTACTAAAAACCGGAGGGATTACATAGCCA ACGTACATGCAACTTGAAGT
Downstream 100 bases:
>100_bases AAATAATTAGTGAGAGCGATTAGGGGGAGGTTATATCATCAATAATCTTCAGCAACTGAAAACCGCCGTCGCAGTGTAAT TCCCCCCAATATTTAGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTGSWQKIRQGMMMSLIKSTLIFGVLLVVSFGTLAMSDECKQAYGIFDDAAYFSGKMNVKPGDGKEVTKTNVNVEAFNEW YYRSYDDEWMAVLEKYTKFKGVDDDSVIGISLLAFIETSGLVEFYKSYIDFLTDFPKRTDTYLVSGRVEAAKKKIDDAYK ELVGHCNK
Sequences:
>Translated_168_residues MTGSWQKIRQGMMMSLIKSTLIFGVLLVVSFGTLAMSDECKQAYGIFDDAAYFSGKMNVKPGDGKEVTKTNVNVEAFNEW YYRSYDDEWMAVLEKYTKFKGVDDDSVIGISLLAFIETSGLVEFYKSYIDFLTDFPKRTDTYLVSGRVEAAKKKIDDAYK ELVGHCNK >Mature_167_residues TGSWQKIRQGMMMSLIKSTLIFGVLLVVSFGTLAMSDECKQAYGIFDDAAYFSGKMNVKPGDGKEVTKTNVNVEAFNEWY YRSYDDEWMAVLEKYTKFKGVDDDSVIGISLLAFIETSGLVEFYKSYIDFLTDFPKRTDTYLVSGRVEAAKKKIDDAYKE LVGHCNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19070; Mature: 18939
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSWQKIRQGMMMSLIKSTLIFGVLLVVSFGTLAMSDECKQAYGIFDDAAYFSGKMNVK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC PGDGKEVTKTNVNVEAFNEWYYRSYDDEWMAVLEKYTKFKGVDDDSVIGISLLAFIETSG CCCCCCHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LVEFYKSYIDFLTDFPKRTDTYLVSGRVEAAKKKIDDAYKELVGHCNK HHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TGSWQKIRQGMMMSLIKSTLIFGVLLVVSFGTLAMSDECKQAYGIFDDAAYFSGKMNVK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC PGDGKEVTKTNVNVEAFNEWYYRSYDDEWMAVLEKYTKFKGVDDDSVIGISLLAFIETSG CCCCCCHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LVEFYKSYIDFLTDFPKRTDTYLVSGRVEAAKKKIDDAYKELVGHCNK HHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA