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The map label for this gene is 22125444

Identifier: 22125444

GI number: 22125444

Start: 1715124

End: 1715723

Strand: Direct

Name: 22125444

Synonym: y1548

Alternate gene names: NA

Gene position: 1715124-1715723 (Clockwise)

Preceding gene: 22125443

Following gene: 22125445

Centisome position: 37.28

GC content: 42.0

Gene sequence:

>600_bases
TTGTGGATAAGGCTTAACGTTTTTTTAATTAGGCTAAGTATGATTTTAATTAGGCTAAGTATGAATAAAAGTATCCGAGG
GGTTTACCGGGCGACACAGTACTTATTTTTGGTACTGGTAACGTTATTGACGATAGCCTGTAGTTCAAAAGTGCAACCTG
AAAAGGCTGAAAAGCTTACCGTCGAAATCGCGACAGCAGCGGATATTAATCCGAATGATAAAGGGGTGGCGAACCCGCTA
AGGATTGCACTTTATACACTCAAGAGCACCGATGAATTTCAGTCGAGTGATTTCTTCACTATCACTGAAGAAAATACGCC
ATCGCTAAAAGAACAAATGGATAACGTGTTTGACCGGATTATGTTGCCAAGCGAGACCAAAAAAATAGAGCTGACACTTG
ATGCTGGCGTTACTGCTATCGGCATCGTGGCTGCTTATCGTGAAATTGAACAGGCGGAGTGGAAAGCGGTTATTTATCCG
TTGCCCAAAAAACGCGTGGATCCTTGGTATAAAAAAATGTGGCCAGGGCAAGACCAACAAGATCCGATCATGAAGGTACG
CGTTGAGCGTCTGTCAATATCAATTAAAGAAATGGATTAA

Upstream 100 bases:

>100_bases
TTTATCCACAATACGTGTAAAAGGACATACAGAAGCGTCAGCGTGCAGGGATGTCAATGAGCCCCGTCATGATGCCGTTA
ATCTGTAGCTGAAAATATTA

Downstream 100 bases:

>100_bases
GCCGTGAGAACTAACAAAGTCGTTTGGAGTGAGGGGCTTTTTCTTCGCCCACAACTTTTTCAACAGCAAGAGCGCTATCT
TGAATATTACGCCCATAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Lipoprotein; Replication/Virulence Associated Protein; Outer Membrane Lipoprotein; T6ss N; SciN Protein

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MWIRLNVFLIRLSMILIRLSMNKSIRGVYRATQYLFLVLVTLLTIACSSKVQPEKAEKLTVEIATAADINPNDKGVANPL
RIALYTLKSTDEFQSSDFFTITEENTPSLKEQMDNVFDRIMLPSETKKIELTLDAGVTAIGIVAAYREIEQAEWKAVIYP
LPKKRVDPWYKKMWPGQDQQDPIMKVRVERLSISIKEMD

Sequences:

>Translated_199_residues
MWIRLNVFLIRLSMILIRLSMNKSIRGVYRATQYLFLVLVTLLTIACSSKVQPEKAEKLTVEIATAADINPNDKGVANPL
RIALYTLKSTDEFQSSDFFTITEENTPSLKEQMDNVFDRIMLPSETKKIELTLDAGVTAIGIVAAYREIEQAEWKAVIYP
LPKKRVDPWYKKMWPGQDQQDPIMKVRVERLSISIKEMD
>Mature_199_residues
MWIRLNVFLIRLSMILIRLSMNKSIRGVYRATQYLFLVLVTLLTIACSSKVQPEKAEKLTVEIATAADINPNDKGVANPL
RIALYTLKSTDEFQSSDFFTITEENTPSLKEQMDNVFDRIMLPSETKKIELTLDAGVTAIGIVAAYREIEQAEWKAVIYP
LPKKRVDPWYKKMWPGQDQQDPIMKVRVERLSISIKEMD

Specific function: Unknown

COG id: COG3521

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22856; Mature: 22856

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWIRLNVFLIRLSMILIRLSMNKSIRGVYRATQYLFLVLVTLLTIACSSKVQPEKAEKLT
CEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEE
VEIATAADINPNDKGVANPLRIALYTLKSTDEFQSSDFFTITEENTPSLKEQMDNVFDRI
EEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH
MLPSETKKIELTLDAGVTAIGIVAAYREIEQAEWKAVIYPLPKKRVDPWYKKMWPGQDQQ
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHCCCCCCCC
DPIMKVRVERLSISIKEMD
CCHHHHHHHHHEEEEEECC
>Mature Secondary Structure
MWIRLNVFLIRLSMILIRLSMNKSIRGVYRATQYLFLVLVTLLTIACSSKVQPEKAEKLT
CEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEE
VEIATAADINPNDKGVANPLRIALYTLKSTDEFQSSDFFTITEENTPSLKEQMDNVFDRI
EEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH
MLPSETKKIELTLDAGVTAIGIVAAYREIEQAEWKAVIYPLPKKRVDPWYKKMWPGQDQQ
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHCCCCCCCC
DPIMKVRVERLSISIKEMD
CCHHHHHHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA