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The map label for this gene is yfuB [H]

Identifier: 22125422

GI number: 22125422

Start: 1686336

End: 1687937

Strand: Reverse

Name: yfuB [H]

Synonym: y1525

Alternate gene names: 22125422

Gene position: 1687937-1686336 (Counterclockwise)

Preceding gene: 22125423

Following gene: 22125421

Centisome position: 36.69

GC content: 52.5

Gene sequence:

>1602_bases
GTGTCTTTACCGATTATGTCCAATATAAGTACCGATGTTGCACAGGCTGCACTGAGTAAGACAACAGCACGACAATATAG
TCACCGTCCGGGTACAGGGGTTGTTGTTGTTGCGATCATACTGTCGCTGTTATCCCTGCTACCACTGGGCTTTGTTATCG
GTATTGCAATTGATACAGGTTGGTCAACGGTTAAGGCACTCGTTTTTCGCCCTCGCGTGGGCGAATTACTGATCAATACC
GTTTTACTGGTGGTTTTCACCTTACCCCTTTGCGCCACGATTGGCGTTGCATTAGCCTGGCTGACAGAACGCACTGCCCT
GCCCGGCAGGCGACTTTGGTCACTTCTGGCAATAGCACCACTGGCAGTACCTGCTTTTGTACAAAGTTATGCCTGGATCA
GTCTGATCCCCTCAATGAATGGGCTGGCCGCCGGCGTTTTTATCTCGGTGATAGCGTATTTTCCGTTCATCTATTTGCCT
GTAGCGGCGGTATTACGCCGTCTTGACCCTGGGCTTGAAGATGCCGCCGCATCATTGGGCAATAAACCCATCACGGTATT
TTTCCGCGTGACATTGCCACAGTTAAAATTAGCGTTATGGGGGGGATCATTACTTATCGCCCTGCATTTGCTGGCTGAAT
ATGGCCTGTATGCCATGATCCGTTTTGATACCTTTACGACCGCGATTTTTGACCAGTTCCAATCCACATTTAATGGCCCC
GCCGCTAACATGCTGGCGGGAGTACTCGCCTTATGTTGTTTGGGGTTACTGTTGGTCGAAGCCACCAGCCGGGGCTACCA
TCGTTACGCGCGGGTCGGTTCCGGTACGCCACGGCGTCAAACCGTCTATTCGATGGGGACCTCACTCACCCTCCTGTGTC
TGCTATTGCCCTTATTGATCACCACCCTCTCCTTGGGCGTTCCGTTCATTACCCTTATGCGCTGGCTCTCTATTGGTGGC
ATTGATATCTGGTTGAACCCGGAACTGCTGCCCGCGTTAAAACAAACGCTGGGATTAGCCCTGAGCGGGGCGGTGATCAT
TACGCTGTGTGCTATACCAATGGCCTGGCTATCGGTGCGCTATCCGGGGCGGTTACACCGCGCGATGGAAGGGTGTTATT
ACGTCACCAGTTCGCTACCCGGGATCGTCGTGGCACTGGCATTAGTGACCATCACTATCCGTATTGCACGCCCTTTGTAT
CAAACTGAATTTACCGTGCTACTGGCGTATTTATTGATGTTTACGCCACGTGCATTAATCAGTTTACGGGCTGGTATTGC
ACAAGCGCCGGTCGAGTTAGAGAACGTCGCCCGTAGCCTTGGGCGAACACCGACCCAAGCTATGTTAAGTACCACCCTGC
GGTTGGCTGCTCCCGGCGCCGCTGCGGGTGCCGCATTAGTCTTTCTGGCTATCTCCAACGAATTGACCGCAACGCTATTA
CTGGCCCCGAACGGCACCCGAACACTGGCAACTGGGTTTTGGGCATTGACCAGTGAAATTGATTATGTCGCCGCTGCACC
TTATGCTTTTCTGATGGTGGCACTTTCCCTGCCGTTAACCTGGCTTCTCTACTCTCAATCTCAACGGACAGCAGGACTAT
GA

Upstream 100 bases:

>100_bases
GTGTCTAAACTGAACAGCAAAAAAGTGGTTGAGTTGATGACCGAAGCGGGTCTGCTGTAATCCGTTTTACTCCGCCCCCT
GCGGGCGTTTAACAAACCGA

Downstream 100 bases:

>100_bases
GCACGCTTGAACTTCATCATATCGGTAAGTCTTATCAATCTGTCATGGTACTGGACCGAATTGATTTACATGTCCCGCCA
GGTAGCCGCACCGCCATTGT

Product: iron(III)-transport system permease

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: Iron(III)-transport system permease protein sfuB [H]

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MSLPIMSNISTDVAQAALSKTTARQYSHRPGTGVVVVAIILSLLSLLPLGFVIGIAIDTGWSTVKALVFRPRVGELLINT
VLLVVFTLPLCATIGVALAWLTERTALPGRRLWSLLAIAPLAVPAFVQSYAWISLIPSMNGLAAGVFISVIAYFPFIYLP
VAAVLRRLDPGLEDAAASLGNKPITVFFRVTLPQLKLALWGGSLLIALHLLAEYGLYAMIRFDTFTTAIFDQFQSTFNGP
AANMLAGVLALCCLGLLLVEATSRGYHRYARVGSGTPRRQTVYSMGTSLTLLCLLLPLLITTLSLGVPFITLMRWLSIGG
IDIWLNPELLPALKQTLGLALSGAVIITLCAIPMAWLSVRYPGRLHRAMEGCYYVTSSLPGIVVALALVTITIRIARPLY
QTEFTVLLAYLLMFTPRALISLRAGIAQAPVELENVARSLGRTPTQAMLSTTLRLAAPGAAAGAALVFLAISNELTATLL
LAPNGTRTLATGFWALTSEIDYVAAAPYAFLMVALSLPLTWLLYSQSQRTAGL

Sequences:

>Translated_533_residues
MSLPIMSNISTDVAQAALSKTTARQYSHRPGTGVVVVAIILSLLSLLPLGFVIGIAIDTGWSTVKALVFRPRVGELLINT
VLLVVFTLPLCATIGVALAWLTERTALPGRRLWSLLAIAPLAVPAFVQSYAWISLIPSMNGLAAGVFISVIAYFPFIYLP
VAAVLRRLDPGLEDAAASLGNKPITVFFRVTLPQLKLALWGGSLLIALHLLAEYGLYAMIRFDTFTTAIFDQFQSTFNGP
AANMLAGVLALCCLGLLLVEATSRGYHRYARVGSGTPRRQTVYSMGTSLTLLCLLLPLLITTLSLGVPFITLMRWLSIGG
IDIWLNPELLPALKQTLGLALSGAVIITLCAIPMAWLSVRYPGRLHRAMEGCYYVTSSLPGIVVALALVTITIRIARPLY
QTEFTVLLAYLLMFTPRALISLRAGIAQAPVELENVARSLGRTPTQAMLSTTLRLAAPGAAAGAALVFLAISNELTATLL
LAPNGTRTLATGFWALTSEIDYVAAAPYAFLMVALSLPLTWLLYSQSQRTAGL
>Mature_532_residues
SLPIMSNISTDVAQAALSKTTARQYSHRPGTGVVVVAIILSLLSLLPLGFVIGIAIDTGWSTVKALVFRPRVGELLINTV
LLVVFTLPLCATIGVALAWLTERTALPGRRLWSLLAIAPLAVPAFVQSYAWISLIPSMNGLAAGVFISVIAYFPFIYLPV
AAVLRRLDPGLEDAAASLGNKPITVFFRVTLPQLKLALWGGSLLIALHLLAEYGLYAMIRFDTFTTAIFDQFQSTFNGPA
ANMLAGVLALCCLGLLLVEATSRGYHRYARVGSGTPRRQTVYSMGTSLTLLCLLLPLLITTLSLGVPFITLMRWLSIGGI
DIWLNPELLPALKQTLGLALSGAVIITLCAIPMAWLSVRYPGRLHRAMEGCYYVTSSLPGIVVALALVTITIRIARPLYQ
TEFTVLLAYLLMFTPRALISLRAGIAQAPVELENVARSLGRTPTQAMLSTTLRLAAPGAAAGAALVFLAISNELTATLLL
APNGTRTLATGFWALTSEIDYVAAAPYAFLMVALSLPLTWLLYSQSQRTAGL

Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1178

COG function: function code P; ABC-type Fe3+ transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transmembrane type-1 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 57141; Mature: 57010

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPIMSNISTDVAQAALSKTTARQYSHRPGTGVVVVAIILSLLSLLPLGFVIGIAIDTG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WSTVKALVFRPRVGELLINTVLLVVFTLPLCATIGVALAWLTERTALPGRRLWSLLAIAP
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LAVPAFVQSYAWISLIPSMNGLAAGVFISVIAYFPFIYLPVAAVLRRLDPGLEDAAASLG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
NKPITVFFRVTLPQLKLALWGGSLLIALHLLAEYGLYAMIRFDTFTTAIFDQFQSTFNGP
CCCEEEEEEEEHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCC
AANMLAGVLALCCLGLLLVEATSRGYHRYARVGSGTPRRQTVYSMGTSLTLLCLLLPLLI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHH
TTLSLGVPFITLMRWLSIGGIDIWLNPELLPALKQTLGLALSGAVIITLCAIPMAWLSVR
HHHHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YPGRLHRAMEGCYYVTSSLPGIVVALALVTITIRIARPLYQTEFTVLLAYLLMFTPRALI
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
SLRAGIAQAPVELENVARSLGRTPTQAMLSTTLRLAAPGAAAGAALVFLAISNELTATLL
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCEEEEE
LAPNGTRTLATGFWALTSEIDYVAAAPYAFLMVALSLPLTWLLYSQSQRTAGL
ECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SLPIMSNISTDVAQAALSKTTARQYSHRPGTGVVVVAIILSLLSLLPLGFVIGIAIDTG
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WSTVKALVFRPRVGELLINTVLLVVFTLPLCATIGVALAWLTERTALPGRRLWSLLAIAP
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LAVPAFVQSYAWISLIPSMNGLAAGVFISVIAYFPFIYLPVAAVLRRLDPGLEDAAASLG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
NKPITVFFRVTLPQLKLALWGGSLLIALHLLAEYGLYAMIRFDTFTTAIFDQFQSTFNGP
CCCEEEEEEEEHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCC
AANMLAGVLALCCLGLLLVEATSRGYHRYARVGSGTPRRQTVYSMGTSLTLLCLLLPLLI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHH
TTLSLGVPFITLMRWLSIGGIDIWLNPELLPALKQTLGLALSGAVIITLCAIPMAWLSVR
HHHHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YPGRLHRAMEGCYYVTSSLPGIVVALALVTITIRIARPLYQTEFTVLLAYLLMFTPRALI
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
SLRAGIAQAPVELENVARSLGRTPTQAMLSTTLRLAAPGAAAGAALVFLAISNELTATLL
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCEEEEE
LAPNGTRTLATGFWALTSEIDYVAAAPYAFLMVALSLPLTWLLYSQSQRTAGL
ECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2404942 [H]