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The map label for this gene is napD [H]

Identifier: 22125341

GI number: 22125341

Start: 1600843

End: 1601115

Strand: Direct

Name: napD [H]

Synonym: y1443

Alternate gene names: 22125341

Gene position: 1600843-1601115 (Clockwise)

Preceding gene: 22125340

Following gene: 161484836

Centisome position: 34.8

GC content: 52.01

Gene sequence:

>273_bases
GTGAAGATGGACGATAACGAATGGCATGTTTGTGGATTGGTGCTGCAAGCCAAACCGGCACGTTTTGTGCAGCTGATGGA
CCACCTGCTCGCTATCCCGGGAACAGAAATACCCACCAGTGACCCTGCTTTGGGCAAGTTGGTGGTGGTTATGCAGGCAG
CGCGCTCAGACACGCTCCTGAATCATATTGAGTCAGCACGTAATCTGGATGGTGTGTTGGCTGTATCGCTGGTTTATCAC
CAGCAGGATTTGCAAGGTGAGGAAATGCCATGA

Upstream 100 bases:

>100_bases
TTGAGCGGCATTGCTCAACCTGAATTAGACCTTCCTGCCTGTACCGGCTGCGGCGCTTGTGTGCCGGGGTGTCCAGTGCA
GGCGGTAACCCTTACCCGGA

Downstream 100 bases:

>100_bases
AACTCAGTCGCCGGGACTTTATGAAAGCGAATGCGGCCGTTGCTGCGGCTGCCGCCGCCGGAATGACCATACCTACTGTC
GCTAAAGCGGTGGGTGAGAC

Product: assembly protein for periplasmic nitrate reductase

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MKMDDNEWHVCGLVLQAKPARFVQLMDHLLAIPGTEIPTSDPALGKLVVVMQAARSDTLLNHIESARNLDGVLAVSLVYH
QQDLQGEEMP

Sequences:

>Translated_90_residues
MKMDDNEWHVCGLVLQAKPARFVQLMDHLLAIPGTEIPTSDPALGKLVVVMQAARSDTLLNHIESARNLDGVLAVSLVYH
QQDLQGEEMP
>Mature_90_residues
MKMDDNEWHVCGLVLQAKPARFVQLMDHLLAIPGTEIPTSDPALGKLVVVMQAARSDTLLNHIESARNLDGVLAVSLVYH
QQDLQGEEMP

Specific function: Plays a role in the correct assembly of subunits of the periplasmic napAB enzyme [H]

COG id: COG3062

COG function: function code P; Uncharacterized protein involved in formation of periplasmic nitrate reductase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788535, Length=83, Percent_Identity=55.421686746988, Blast_Score=98, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005623 [H]

Pfam domain/function: PF03927 NapD [H]

EC number: NA

Molecular weight: Translated: 9932; Mature: 9932

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMDDNEWHVCGLVLQAKPARFVQLMDHLLAIPGTEIPTSDPALGKLVVVMQAARSDTLL
CCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
NHIESARNLDGVLAVSLVYHQQDLQGEEMP
HHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKMDDNEWHVCGLVLQAKPARFVQLMDHLLAIPGTEIPTSDPALGKLVVVMQAARSDTLL
CCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
NHIESARNLDGVLAVSLVYHQQDLQGEEMP
HHHHHHCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]