| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is fliB [H]
Identifier: 22125301
GI number: 22125301
Start: 1561685
End: 1562518
Strand: Direct
Name: fliB [H]
Synonym: y1403
Alternate gene names: 22125301
Gene position: 1561685-1562518 (Clockwise)
Preceding gene: 22125300
Following gene: 161484837
Centisome position: 33.94
GC content: 45.32
Gene sequence:
>834_bases ATGTCGCTCTCCTGCCCAGAAGTGACTCGACAGGTATTATTTTCAGCGGATGCATTAACTCTACGTTTCTCTACGATCAA CCAATATGATTATTTTAAGGCGTCTGAGATTGTGACGGAGGAGCGGTTGGCTAATCGTGCCTGTGCGGCGCTAGCAATGA ATCAACAGGAGAATATTGAAGAAAATCTTTGGGCAATAAATCAATTTTTGCAGAGCTATCAGGCTGGCAATGACGTTAAT AAAATTAAAATGGCTGAAATCGATGGCCTGCGTGACGCATTAATCAGTGCCATGGCAGCGGGGGGGGCGGTGAACGAGTT ACAGGCGGTTGATCCTGATACTGCCCTCGTTAAGGTGTTATTGGCTTGCCTGGGGCATTTTATGACACAATTGCCTGATA TCCGCGGTAAAAAAACGCTCGCTAATTATGCGCATACGGCACTGGCTTATTTCACCGAGGCGGATCCTGAACCGCAATGG AGAAATACCTGGTCTCAACAGGCATGGCCCTTTTTCTTACAGCACACGTCGGTATTGCGTAATTACCTTCTTTATCGTAT TCATCATGACCAATTGGCGATGGGGAATGAACTGCCGGTGGCCGCTGCATTTAATTTAGTGGTCATTGATTATTTTTATC TGAAATTACTCATCAGTACTTACGCCAATAAAAACGGGCAACTGACGGAAGATGACATCATTGATATTATTTATTCTTAC CATGCCTGCCGCGAGTCAACAGAGCGTTCGAGTCAACAGTTTAAACAGGAACTGACGGCTTTGGCGATGAGCGATGATTT TCCGTTATTGTCTTTGCTGGCACTCAGTCAGTGA
Upstream 100 bases:
>100_bases GTTTATGCCAAATTTATAAGCACACCGGTATTAATGCGTTGAGTACCTCTTGTGCCACGTATCCTCGCGTTGAGCATATT TATATCAAAAAATTAAAAGT
Downstream 100 bases:
>100_bases TGCGGCTGATTGCGCATAGCCAACGCACATGTAGCTTGATGTATGACGGAGATAACGGGGAAGAAACAATTGGGGCCATC TGACCCCAACGTATTAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Lysine N-methyltransferase [H]
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSLSCPEVTRQVLFSADALTLRFSTINQYDYFKASEIVTEERLANRACAALAMNQQENIEENLWAINQFLQSYQAGNDVN KIKMAEIDGLRDALISAMAAGGAVNELQAVDPDTALVKVLLACLGHFMTQLPDIRGKKTLANYAHTALAYFTEADPEPQW RNTWSQQAWPFFLQHTSVLRNYLLYRIHHDQLAMGNELPVAAAFNLVVIDYFYLKLLISTYANKNGQLTEDDIIDIIYSY HACRESTERSSQQFKQELTALAMSDDFPLLSLLALSQ
Sequences:
>Translated_277_residues MSLSCPEVTRQVLFSADALTLRFSTINQYDYFKASEIVTEERLANRACAALAMNQQENIEENLWAINQFLQSYQAGNDVN KIKMAEIDGLRDALISAMAAGGAVNELQAVDPDTALVKVLLACLGHFMTQLPDIRGKKTLANYAHTALAYFTEADPEPQW RNTWSQQAWPFFLQHTSVLRNYLLYRIHHDQLAMGNELPVAAAFNLVVIDYFYLKLLISTYANKNGQLTEDDIIDIIYSY HACRESTERSSQQFKQELTALAMSDDFPLLSLLALSQ >Mature_276_residues SLSCPEVTRQVLFSADALTLRFSTINQYDYFKASEIVTEERLANRACAALAMNQQENIEENLWAINQFLQSYQAGNDVNK IKMAEIDGLRDALISAMAAGGAVNELQAVDPDTALVKVLLACLGHFMTQLPDIRGKKTLANYAHTALAYFTEADPEPQWR NTWSQQAWPFFLQHTSVLRNYLLYRIHHDQLAMGNELPVAAAFNLVVIDYFYLKLLISTYANKNGQLTEDDIIDIIYSYH ACRESTERSSQQFKQELTALAMSDDFPLLSLLALSQ
Specific function: Post-translationally modifies flagellin by methylation of epsilon amino group of surface-exposed lysine residues [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020193 - ProDom: PD035357 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31288; Mature: 31157
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSCPEVTRQVLFSADALTLRFSTINQYDYFKASEIVTEERLANRACAALAMNQQENIE CCCCCHHHHHHHHHCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH ENLWAINQFLQSYQAGNDVNKIKMAEIDGLRDALISAMAAGGAVNELQAVDPDTALVKVL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHH LACLGHFMTQLPDIRGKKTLANYAHTALAYFTEADPEPQWRNTWSQQAWPFFLQHTSVLR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHH NYLLYRIHHDQLAMGNELPVAAAFNLVVIDYFYLKLLISTYANKNGQLTEDDIIDIIYSY HHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH HACRESTERSSQQFKQELTALAMSDDFPLLSLLALSQ HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure SLSCPEVTRQVLFSADALTLRFSTINQYDYFKASEIVTEERLANRACAALAMNQQENIE CCCCHHHHHHHHHCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH ENLWAINQFLQSYQAGNDVNKIKMAEIDGLRDALISAMAAGGAVNELQAVDPDTALVKVL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHH LACLGHFMTQLPDIRGKKTLANYAHTALAYFTEADPEPQWRNTWSQQAWPFFLQHTSVLR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHH NYLLYRIHHDQLAMGNELPVAAAFNLVVIDYFYLKLLISTYANKNGQLTEDDIIDIIYSY HHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH HACRESTERSSQQFKQELTALAMSDDFPLLSLLALSQ HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11142406 [H]