Click here to switch to the map view.

The map label for this gene is yfgL [H]

Identifier: 22125255

GI number: 22125255

Start: 1507304

End: 1508485

Strand: Direct

Name: yfgL [H]

Synonym: y1356

Alternate gene names: 22125255

Gene position: 1507304-1508485 (Clockwise)

Preceding gene: 22125254

Following gene: 22125256

Centisome position: 32.76

GC content: 50.0

Gene sequence:

>1182_bases
ATGCAATTGCGTAAAACACTCTTAGTAGGACTGGTATCTGTTGCCCTATTGAGTGGTTGCTCACTGTTTAACAGTGAAGA
AGATGTGGTTACCATGTCGCCACTGCCAAAGGTTGAAAATCAATTCTCACCAACTAAGGTGTGGAGCACCTCTGTTGGGA
GCGGTGTTGGTGATTATTACTCCCATTTGCGCCCAGCATGGCAGGGGACTTCCGTATTTGCTGCCGATCGCAAAGGTTTA
GTGAAAGCCATGGATGCAGACACCGGTAAGCAAATCTGGCAAACCGACCTGTCTGAAAAAACGAACTTTCTCTCCAGCAA
CCATTCTGCGATGTTATCTGGTGGCGTAACAGCTTCAGGTTCGCATGTTTATGTTGGCAGTGAAAAAGCGGTGGTTTACG
CGCTTAATGCCTATGATGGTCAGGTTGCATGGCAGACGGTCGTTGCGGGTGAGGCGTTGTCCCGTCCTGTGGTGAGCGAT
GGCGTAGTACTGATCCACACATCAAATGGTATGCTGCAAGCGCTGAATGAGTCTGACGGTGCTATCAAGTGGACACTAAA
TCTGGATACGCCTGCATTGTCTCTGCGTGGTGAGTCAGCCCCTGCGGTTGCATTTGGTGCAGCGATTGTCGGTGGTGACA
ATGGCCGGGTCAGTGCAGTGATGATGGAACAGGGTCAGTTGATCTGGCAACAACGTATCTCACAAGTGACCGGTGCTACT
GAAATTGACCGCTTGAATGATATCGATATCACGCCTGTCGTGGTTGACGGTGTGGTTTATGCGTTGGCTTATAACGGTAA
TCTAACCGCCTTGGATTTGCGTTCCGGCCAGATCCTGTGGAAGCGCGAGATAGGCTCCGTGAATGACTTTATTGTTGACG
CTGGGCGCATTTATCTCGTTGATCAAAATGACCGTATAATCGCGCTGAAGTCTGATGGCGGCGTAACGCTTTGGAGTCAA
AGCGATTTATTGCATCGTAACTTGACCGCTCCAGTGATGTATAATGGCTATCTGGTCGTAGGTGATGCCGAAGGTTATCT
GCACTGGGTGAATACCGATGATGGCCGTTTTGTTGCTCAACAGAGCGTGGACAGCTCAGGTTTCCTGAGTGCGCCAGTGG
TTGCCAGCGATAAGCTGTTGATTCAGGCAAGAAGCGGTACGGTATACGCGTTCACCCGTTAA

Upstream 100 bases:

>100_bases
GCGCTGCTTATAGTAAAGCTATCGAATCTAATGCTTCTCAGGCGCTGCAAGCATTGTTGCGTATGAAACTGAATAACTTG
TCCAGCTAAGGGGTATTCCC

Downstream 100 bases:

>100_bases
TTCTGATTTAGCGCCTGTTGTTTGACAGGCCAGTACCTCAAAAACGGCTCCTGGGACTCAGGGGCCGTTTGTATTCTAAA
AACTGCGCTGTTGAAGGTTC

Product: outer membrane protein assembly complex subunit YfgL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MQLRKTLLVGLVSVALLSGCSLFNSEEDVVTMSPLPKVENQFSPTKVWSTSVGSGVGDYYSHLRPAWQGTSVFAADRKGL
VKAMDADTGKQIWQTDLSEKTNFLSSNHSAMLSGGVTASGSHVYVGSEKAVVYALNAYDGQVAWQTVVAGEALSRPVVSD
GVVLIHTSNGMLQALNESDGAIKWTLNLDTPALSLRGESAPAVAFGAAIVGGDNGRVSAVMMEQGQLIWQQRISQVTGAT
EIDRLNDIDITPVVVDGVVYALAYNGNLTALDLRSGQILWKREIGSVNDFIVDAGRIYLVDQNDRIIALKSDGGVTLWSQ
SDLLHRNLTAPVMYNGYLVVGDAEGYLHWVNTDDGRFVAQQSVDSSGFLSAPVVASDKLLIQARSGTVYAFTR

Sequences:

>Translated_393_residues
MQLRKTLLVGLVSVALLSGCSLFNSEEDVVTMSPLPKVENQFSPTKVWSTSVGSGVGDYYSHLRPAWQGTSVFAADRKGL
VKAMDADTGKQIWQTDLSEKTNFLSSNHSAMLSGGVTASGSHVYVGSEKAVVYALNAYDGQVAWQTVVAGEALSRPVVSD
GVVLIHTSNGMLQALNESDGAIKWTLNLDTPALSLRGESAPAVAFGAAIVGGDNGRVSAVMMEQGQLIWQQRISQVTGAT
EIDRLNDIDITPVVVDGVVYALAYNGNLTALDLRSGQILWKREIGSVNDFIVDAGRIYLVDQNDRIIALKSDGGVTLWSQ
SDLLHRNLTAPVMYNGYLVVGDAEGYLHWVNTDDGRFVAQQSVDSSGFLSAPVVASDKLLIQARSGTVYAFTR
>Mature_393_residues
MQLRKTLLVGLVSVALLSGCSLFNSEEDVVTMSPLPKVENQFSPTKVWSTSVGSGVGDYYSHLRPAWQGTSVFAADRKGL
VKAMDADTGKQIWQTDLSEKTNFLSSNHSAMLSGGVTASGSHVYVGSEKAVVYALNAYDGQVAWQTVVAGEALSRPVVSD
GVVLIHTSNGMLQALNESDGAIKWTLNLDTPALSLRGESAPAVAFGAAIVGGDNGRVSAVMMEQGQLIWQQRISQVTGAT
EIDRLNDIDITPVVVDGVVYALAYNGNLTALDLRSGQILWKREIGSVNDFIVDAGRIYLVDQNDRIIALKSDGGVTLWSQ
SDLLHRNLTAPVMYNGYLVVGDAEGYLHWVNTDDGRFVAQQSVDSSGFLSAPVVASDKLLIQARSGTVYAFTR

Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To R.prowazekii RP232 [H]

Homologues:

Organism=Escherichia coli, GI1788859, Length=393, Percent_Identity=76.3358778625954, Blast_Score=604, Evalue=1e-174,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017687
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047 [H]

Pfam domain/function: PF01011 PQQ [H]

EC number: NA

Molecular weight: Translated: 42092; Mature: 42092

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLRKTLLVGLVSVALLSGCSLFNSEEDVVTMSPLPKVENQFSPTKVWSTSVGSGVGDYY
CCHHHHHHHHHHHHHHHCCCHHCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCCHHHHH
SHLRPAWQGTSVFAADRKGLVKAMDADTGKQIWQTDLSEKTNFLSSNHSAMLSGGVTASG
HHCCCCCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCEECCC
SHVYVGSEKAVVYALNAYDGQVAWQTVVAGEALSRPVVSDGVVLIHTSNGMLQALNESDG
CEEEECCCCEEEEEEECCCCCEEEEEEECCHHHCCCCCCCCEEEEECCCCEEEEECCCCC
AIKWTLNLDTPALSLRGESAPAVAFGAAIVGGDNGRVSAVMMEQGQLIWQQRISQVTGAT
EEEEEEECCCCEEEECCCCCCCEEEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHCCCC
EIDRLNDIDITPVVVDGVVYALAYNGNLTALDLRSGQILWKREIGSVNDFIVDAGRIYLV
HHCCCCCCCCCEEEECCEEEEEEECCCEEEEEECCCCEEEEECCCCCCCEEEECCEEEEE
DQNDRIIALKSDGGVTLWSQSDLLHRNLTAPVMYNGYLVVGDAEGYLHWVNTDDGRFVAQ
ECCCCEEEEECCCCEEEEECCCHHHCCCCCCEEECCEEEEECCCCEEEEEECCCCCEEEE
QSVDSSGFLSAPVVASDKLLIQARSGTVYAFTR
CCCCCCCCEECCEEECCEEEEEECCCEEEEEEC
>Mature Secondary Structure
MQLRKTLLVGLVSVALLSGCSLFNSEEDVVTMSPLPKVENQFSPTKVWSTSVGSGVGDYY
CCHHHHHHHHHHHHHHHCCCHHCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCCHHHHH
SHLRPAWQGTSVFAADRKGLVKAMDADTGKQIWQTDLSEKTNFLSSNHSAMLSGGVTASG
HHCCCCCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCEECCC
SHVYVGSEKAVVYALNAYDGQVAWQTVVAGEALSRPVVSDGVVLIHTSNGMLQALNESDG
CEEEECCCCEEEEEEECCCCCEEEEEEECCHHHCCCCCCCCEEEEECCCCEEEEECCCCC
AIKWTLNLDTPALSLRGESAPAVAFGAAIVGGDNGRVSAVMMEQGQLIWQQRISQVTGAT
EEEEEEECCCCEEEECCCCCCCEEEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHCCCC
EIDRLNDIDITPVVVDGVVYALAYNGNLTALDLRSGQILWKREIGSVNDFIVDAGRIYLV
HHCCCCCCCCCEEEECCEEEEEEECCCEEEEEECCCCEEEEECCCCCCCEEEECCEEEEE
DQNDRIIALKSDGGVTLWSQSDLLHRNLTAPVMYNGYLVVGDAEGYLHWVNTDDGRFVAQ
ECCCCEEEEECCCCEEEEECCCHHHCCCCCCEEECCEEEEECCCCEEEEEECCCCCEEEE
QSVDSSGFLSAPVVASDKLLIQARSGTVYAFTR
CCCCCCCCEECCEEECCEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]