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The map label for this gene is ompX [H]

Identifier: 22125223

GI number: 22125223

Start: 1472241

End: 1472825

Strand: Direct

Name: ompX [H]

Synonym: y1324

Alternate gene names: 22125223

Gene position: 1472241-1472825 (Clockwise)

Preceding gene: 22125222

Following gene: 22125224

Centisome position: 32.0

GC content: 40.0

Gene sequence:

>585_bases
GTGGTTACTGTATTAGGTATTGTTATAACAATCTGGATGGTTTTTATGAATAAGACATTACTGGTCTCTTCTTTAATTGC
ATGTTTATCAATTGCGTCTGTTAATGTGTATGCCGAAGGCGAAAGCAGTATTTCTATTGGATATGCTCAAAGTCGTGTCA
AGGAAGATGGGTACAAGTTGGATAAAAATCCAAGAGGTTTCAACCTGAAGTATCGTTATGAATTCAATAATGACTGGGGA
GTGATAGGTTCATTTGCTCAGACTCGCCGGGGGTTCGAGGAATCTGTTGACGGATTCAAACTTATTGATGGTGATTTTAA
GTACTACTCAGTGACTGCGGGGCCTGTTTTCCGCATTAACGAGTATGTTAGCTTGTATGGATTATTGGGGGCAGGTCATG
GAAAGGCTAAATTTTCCTCAATATTTGGTCAATCAGAGAGTAGAAGTAAAACATCTCTGGCATACGGTGCCGGATTACAA
TTTAATCCACATCCAAATTTTGTCATTGATGCTTCATATGAATACTCCAAACTCGATGATGTGAAAGTGGGTACTTGGAT
GCTTGGCGCGGGTTACCGGTTCTAA

Upstream 100 bases:

>100_bases
CTGTATAAACCGAGAAAATGTGTGTAATGGAATACTGTACGAATATCCATATTTTTCATGTGTCAGATATTTGTTAATAT
TTGGCTGGCCACTTTAGTCT

Downstream 100 bases:

>100_bases
CGTCCTCCTAACCATGAAAACCCACCATAATGGTGGTTTCAAATTGCTGACAAAGTCCTGGCCTTATAGCTGGGGCTTTA
AATTAATAGGGGTAGGCTAA

Product: attachment invasion locus protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MVTVLGIVITIWMVFMNKTLLVSSLIACLSIASVNVYAEGESSISIGYAQSRVKEDGYKLDKNPRGFNLKYRYEFNNDWG
VIGSFAQTRRGFEESVDGFKLIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKFSSIFGQSESRSKTSLAYGAGLQ
FNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF

Sequences:

>Translated_194_residues
MVTVLGIVITIWMVFMNKTLLVSSLIACLSIASVNVYAEGESSISIGYAQSRVKEDGYKLDKNPRGFNLKYRYEFNNDWG
VIGSFAQTRRGFEESVDGFKLIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKFSSIFGQSESRSKTSLAYGAGLQ
FNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF
>Mature_194_residues
MVTVLGIVITIWMVFMNKTLLVSSLIACLSIASVNVYAEGESSISIGYAQSRVKEDGYKLDKNPRGFNLKYRYEFNNDWG
VIGSFAQTRRGFEESVDGFKLIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKFSSIFGQSESRSKTSLAYGAGLQ
FNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF

Specific function: Promotes the invasion of pathogenic bacteria into eukaryotic cells by an unknown mechanism [H]

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ail/ompX/pagC/lom family [H]

Homologues:

Organism=Escherichia coli, GI1787034, Length=179, Percent_Identity=43.0167597765363, Blast_Score=123, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000758
- InterPro:   IPR011250 [H]

Pfam domain/function: PF06316 Ail_Lom [H]

EC number: NA

Molecular weight: Translated: 21569; Mature: 21569

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS00694 ENT_VIR_OMP_1 ; PS00695 ENT_VIR_OMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTVLGIVITIWMVFMNKTLLVSSLIACLSIASVNVYAEGESSISIGYAQSRVKEDGYKL
CEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEEECCCCCEEECHHHHHHHCCCEEC
DKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEESVDGFKLIDGDFKYYSVTAGPVFRIN
CCCCCCCEEEEEEEECCCCCCCCCHHHHHCCHHHCCCCEEEECCCEEEEEEECCCEEEHH
EYVSLYGLLGAGHGKAKFSSIFGQSESRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDD
HHHEEHHHCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCEECCCCCEEEECCCCCCCCCC
VKVGTWMLGAGYRF
EEECEEEECCCCCC
>Mature Secondary Structure
MVTVLGIVITIWMVFMNKTLLVSSLIACLSIASVNVYAEGESSISIGYAQSRVKEDGYKL
CEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEEECCCCCEEECHHHHHHHCCCEEC
DKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEESVDGFKLIDGDFKYYSVTAGPVFRIN
CCCCCCCEEEEEEEECCCCCCCCCHHHHHCCHHHCCCCEEEECCCEEEEEEECCCEEEHH
EYVSLYGLLGAGHGKAKFSSIFGQSESRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDD
HHHEEHHHCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCEECCCCCEEEECCCCCCCCCC
VKVGTWMLGAGYRF
EEECEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8698470 [H]