| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is yplA [H]
Identifier: 22125184
GI number: 22125184
Start: 1428143
End: 1429006
Strand: Direct
Name: yplA [H]
Synonym: y1284
Alternate gene names: 22125184
Gene position: 1428143-1429006 (Clockwise)
Preceding gene: 161484840
Following gene: 22125185
Centisome position: 31.04
GC content: 50.35
Gene sequence:
>864_bases GTGACCACCACACAGGCCCCCAAAATAGCAGAGGCAATTCACCGATCAACTCCCACGTTGGCGGACAATGTTCTCTATGA CAGTACGTCATACACTCACGGGGTGACCACAGGCAGTACCAATGTACCAATATCAAGTGGGCAGAGACCACAGCAAGCGG ATTATTCATTAGCACTGCTCGCTAAAGATGTTTATGCCCCCACCTCTGGCAATCTCAACGGGTTTGTCCGTTTAAGTGAC GAGAGGCTACTGGCAGCAGGTATTGACCCAACGGCTTTGTCTGATAGCGCTTCAGGCTTTCTCGCGGGGATTTACAGTGA TAATCAACAGTATGTCTTATCTTTTGCAGGCACTAATGATCGGCACGATTGGTTGAGTAATATCCGACAGGCGGTGGGCT ATGAGGATGTGCAATACAATGAAGCGGTGGCTCTGGGAAAAACAGCAAAAATGGCTTTTGGTGATGCGCTGGTGATCACC GGGCATTCATTGGGCGGTGGGTTGGCGGCTACTGCCGCATTAGCCACTGGGACTTTTGCCGTTACCTTCAATGCCGCGGG GGTTGCCAAGAATACACTCAAACGCCTTGGTATGGACTCGGCTAAAGCGCGGCGTTCGGCAGAGAATGGCGGGATACGGA GCTATAGTGAGAAGTATGATTTACTGACCGGTATTCAGGAGCTAACTTCACTTATTCCTAATGCGGTGGGCCATAAAATA GTCTTGGCCAATAGCGACAAACTGACTGGCGTGGATGATTGGTTACCACACAAACATCTCGAACGCCGTATATCGGCGCA TAGCATTGAGAAAGTACTTAGCTCAATGAGTGAGCAACAGCCTTGGGAGCGGCGGTATGTTTGA
Upstream 100 bases:
>100_bases CATGAGTGCATCTGTCAGTTTGACTACGCCTGTTTCAGTCTCTTGCTTAATAAATGATGTTAATCCATCGGTTAAGGCAA AGAAAGAAGACGCCACGGCG
Downstream 100 bases:
>100_bases ACATAAAGGTGAGATGTCCACGGCGTTATGCCAGTTGCCCTATTTTGATGTTGCTATTGGGTTTCGGGGGATGAGCAATG ACAAAAATTAGTACTGCTTT
Product: phospholipase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MTTTQAPKIAEAIHRSTPTLADNVLYDSTSYTHGVTTGSTNVPISSGQRPQQADYSLALLAKDVYAPTSGNLNGFVRLSD ERLLAAGIDPTALSDSASGFLAGIYSDNQQYVLSFAGTNDRHDWLSNIRQAVGYEDVQYNEAVALGKTAKMAFGDALVIT GHSLGGGLAATAALATGTFAVTFNAAGVAKNTLKRLGMDSAKARRSAENGGIRSYSEKYDLLTGIQELTSLIPNAVGHKI VLANSDKLTGVDDWLPHKHLERRISAHSIEKVLSSMSEQQPWERRYV
Sequences:
>Translated_287_residues MTTTQAPKIAEAIHRSTPTLADNVLYDSTSYTHGVTTGSTNVPISSGQRPQQADYSLALLAKDVYAPTSGNLNGFVRLSD ERLLAAGIDPTALSDSASGFLAGIYSDNQQYVLSFAGTNDRHDWLSNIRQAVGYEDVQYNEAVALGKTAKMAFGDALVIT GHSLGGGLAATAALATGTFAVTFNAAGVAKNTLKRLGMDSAKARRSAENGGIRSYSEKYDLLTGIQELTSLIPNAVGHKI VLANSDKLTGVDDWLPHKHLERRISAHSIEKVLSSMSEQQPWERRYV >Mature_286_residues TTTQAPKIAEAIHRSTPTLADNVLYDSTSYTHGVTTGSTNVPISSGQRPQQADYSLALLAKDVYAPTSGNLNGFVRLSDE RLLAAGIDPTALSDSASGFLAGIYSDNQQYVLSFAGTNDRHDWLSNIRQAVGYEDVQYNEAVALGKTAKMAFGDALVITG HSLGGGLAATAALATGTFAVTFNAAGVAKNTLKRLGMDSAKARRSAENGGIRSYSEKYDLLTGIQELTSLIPNAVGHKIV LANSDKLTGVDDWLPHKHLERRISAHSIEKVLSSMSEQQPWERRYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =3.1.1.32 [H]
Molecular weight: Translated: 30717; Mature: 30585
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTQAPKIAEAIHRSTPTLADNVLYDSTSYTHGVTTGSTNVPISSGQRPQQADYSLALL CCCCCCHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEH AKDVYAPTSGNLNGFVRLSDERLLAAGIDPTALSDSASGFLAGIYSDNQQYVLSFAGTND HHHHCCCCCCCCCEEEEECCCEEEEECCCCHHCCCCCCCEEEEEEECCCEEEEEECCCCC RHDWLSNIRQAVGYEDVQYNEAVALGKTAKMAFGDALVITGHSLGGGLAATAALATGTFA HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCHHHHHHHHHCCEEE VTFNAAGVAKNTLKRLGMDSAKARRSAENGGIRSYSEKYDLLTGIQELTSLIPNAVGHKI EEEECCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEE VLANSDKLTGVDDWLPHKHLERRISAHSIEKVLSSMSEQQPWERRYV EEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure TTTQAPKIAEAIHRSTPTLADNVLYDSTSYTHGVTTGSTNVPISSGQRPQQADYSLALL CCCCCHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEH AKDVYAPTSGNLNGFVRLSDERLLAAGIDPTALSDSASGFLAGIYSDNQQYVLSFAGTND HHHHCCCCCCCCCEEEEECCCEEEEECCCCHHCCCCCCCEEEEEEECCCEEEEEECCCCC RHDWLSNIRQAVGYEDVQYNEAVALGKTAKMAFGDALVITGHSLGGGLAATAALATGTFA HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCHHHHHHHHHCCEEE VTFNAAGVAKNTLKRLGMDSAKARRSAENGGIRSYSEKYDLLTGIQELTSLIPNAVGHKI EEEECCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEE VLANSDKLTGVDDWLPHKHLERRISAHSIEKVLSSMSEQQPWERRYV EEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3056919; 8316077; 1640837 [H]