| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22125178
Identifier: 22125178
GI number: 22125178
Start: 1424678
End: 1425097
Strand: Direct
Name: 22125178
Synonym: y1278
Alternate gene names: NA
Gene position: 1424678-1425097 (Clockwise)
Preceding gene: 22125177
Following gene: 22125179
Centisome position: 30.97
GC content: 49.05
Gene sequence:
>420_bases ATGATTTTCCAACAACAATACTTATATTGGCTGGCCGGAGTGGTGCTATTGATTGTCGCGGTGATGTCATTTCGTGATAA AGCCAATCCAAGGCGCTTAACCACCGGTTTGTTTTGGGGGTTGTATGGCTTGATTTTTCTGGTTGGCGATTGGACTTATC GGCTGGCGAATGCGCTGGCGGGCGAAGGCCCAGATGAGAAACGCGTCCTGAATATTATTGTGGGTCTGGTCGTGGTGGTC ATGGCATTGATTGCCGGGTTTGGTGGTGTCAAGCTGGGCAGTTACCATCAACGGACGCCGCAAGAGCGTGAAGTTAGCGC AAAACGTTTAGGTAATCGGCTATTTATTCCGGCATTAGCTATCCCATTGGTTACGGTTATCGGTGTGCTGTTGTTCAATA ACATCCCGGCTCTGCAATAA
Upstream 100 bases:
>100_bases TCCTGATCCATGCCTACCGTTTACAGCGGTTAGATAAACAACTTGCTGCGGAATTAACGGCGCTGAATCAGTCTGCCCTG GCAGCTCAGGGAGAGGCTAA
Downstream 100 bases:
>100_bases GGGATGTTTGGTCCGGGTAACCACTCCACGCTAGTGACGCTATTTTCAATGACGGTCGGTTGTGTTCTTGGCTTGGTCCT TGCCGTGGCGATGACCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MIFQQQYLYWLAGVVLLIVAVMSFRDKANPRRLTTGLFWGLYGLIFLVGDWTYRLANALAGEGPDEKRVLNIIVGLVVVV MALIAGFGGVKLGSYHQRTPQEREVSAKRLGNRLFIPALAIPLVTVIGVLLFNNIPALQ
Sequences:
>Translated_139_residues MIFQQQYLYWLAGVVLLIVAVMSFRDKANPRRLTTGLFWGLYGLIFLVGDWTYRLANALAGEGPDEKRVLNIIVGLVVVV MALIAGFGGVKLGSYHQRTPQEREVSAKRLGNRLFIPALAIPLVTVIGVLLFNNIPALQ >Mature_139_residues MIFQQQYLYWLAGVVLLIVAVMSFRDKANPRRLTTGLFWGLYGLIFLVGDWTYRLANALAGEGPDEKRVLNIIVGLVVVV MALIAGFGGVKLGSYHQRTPQEREVSAKRLGNRLFIPALAIPLVTVIGVLLFNNIPALQ
Specific function: Unknown
COG id: COG3817
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15396; Mature: 15396
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFQQQYLYWLAGVVLLIVAVMSFRDKANPRRLTTGLFWGLYGLIFLVGDWTYRLANALA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEGPDEKRVLNIIVGLVVVVMALIAGFGGVKLGSYHQRTPQEREVSAKRLGNRLFIPALA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHCCCHHHHHHH IPLVTVIGVLLFNNIPALQ HHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIFQQQYLYWLAGVVLLIVAVMSFRDKANPRRLTTGLFWGLYGLIFLVGDWTYRLANALA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEGPDEKRVLNIIVGLVVVVMALIAGFGGVKLGSYHQRTPQEREVSAKRLGNRLFIPALA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHCCCHHHHHHH IPLVTVIGVLLFNNIPALQ HHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA