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The map label for this gene is ybgJ [H]

Identifier: 22125173

GI number: 22125173

Start: 1421531

End: 1422076

Strand: Direct

Name: ybgJ [H]

Synonym: y1273

Alternate gene names: 22125173

Gene position: 1421531-1422076 (Clockwise)

Preceding gene: 22125172

Following gene: 22125175

Centisome position: 30.9

GC content: 53.66

Gene sequence:

>546_bases
GTGCAACGAGCACGATGCTATTTACTGGGAGAGAGTGCGGTGGTGTTGGAGTTAGAACCACCGGTAACATTAGCCAGCCA
GCAACGGATTTGGGGCTTAGCTGATCGCCTAATTCATCATGCCGATATCCTTGAGGTGATCCCTGGCATGAATAATTTAA
CTCTACTGTTGGCCGATCCACACAATACTGCCTTAGATGCGATTGAGCGGTTACAACGTTGGTGGGAAGAGAGCGAGTCA
TTGATACCCGAATCGCGGGATATCACCATCCCGGTAATGTATGGCGGTGAAGTCGGTCCCGATCTGGCTGACGTTGCCCG
TCATACGGGGATGAGTGAACGTCAGGTGGTTGAGTGCCACGCGGGCGCCCGTTATATCGTCTATTTTTTAGGCTTTCAGC
CGGGGTTCTCTTATCTGGGAGGGATGCCAGAGCAACTGGCTACACCACGGCGTGCAGATCCACGTTTAGTCGTTGCACCG
GGTTCGGTCGGGATTGGTGGCAGCCAAACGGGAATTTATCCCTTGGCAACACCGGGAGGGTGGTAG

Upstream 100 bases:

>100_bases
TTGAGATAAGTTTACCGGGATTCGAGTATTTTATTTTGCTGTCGCGCCAATGACGTTGGGTATCTAAAAACAAGAACCAT
AAATTAATCAGGGGGACGGG

Downstream 100 bases:

>100_bases
TTAATTGGTCGCACCTCACTGGCATTGTTTAATCCAGTGGCGATGCCACCGACCTTATTGCGACCTGGGGATAATGTGCG
CTTTCTGCCGCTAAAGGAGG

Product: carboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MQRARCYLLGESAVVLELEPPVTLASQQRIWGLADRLIHHADILEVIPGMNNLTLLLADPHNTALDAIERLQRWWEESES
LIPESRDITIPVMYGGEVGPDLADVARHTGMSERQVVECHAGARYIVYFLGFQPGFSYLGGMPEQLATPRRADPRLVVAP
GSVGIGGSQTGIYPLATPGGW

Sequences:

>Translated_181_residues
MQRARCYLLGESAVVLELEPPVTLASQQRIWGLADRLIHHADILEVIPGMNNLTLLLADPHNTALDAIERLQRWWEESES
LIPESRDITIPVMYGGEVGPDLADVARHTGMSERQVVECHAGARYIVYFLGFQPGFSYLGGMPEQLATPRRADPRLVVAP
GSVGIGGSQTGIYPLATPGGW
>Mature_181_residues
MQRARCYLLGESAVVLELEPPVTLASQQRIWGLADRLIHHADILEVIPGMNNLTLLLADPHNTALDAIERLQRWWEESES
LIPESRDITIPVMYGGEVGPDLADVARHTGMSERQVVECHAGARYIVYFLGFQPGFSYLGGMPEQLATPRRADPRLVVAP
GSVGIGGSQTGIYPLATPGGW

Specific function: Unknown

COG id: COG2049

COG function: function code E; Allophanate hydrolase subunit 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786929, Length=181, Percent_Identity=72.3756906077348, Blast_Score=274, Evalue=3e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003833
- InterPro:   IPR020899
- InterPro:   IPR010016
- InterPro:   IPR002130 [H]

Pfam domain/function: PF02682 AHS1 [H]

EC number: NA

Molecular weight: Translated: 19812; Mature: 19812

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRARCYLLGESAVVLELEPPVTLASQQRIWGLADRLIHHADILEVIPGMNNLTLLLADP
CCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
HNTALDAIERLQRWWEESESLIPESRDITIPVMYGGEVGPDLADVARHTGMSERQVVECH
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCEEEEEC
AGARYIVYFLGFQPGFSYLGGMPEQLATPRRADPRLVVAPGSVGIGGSQTGIYPLATPGG
CCCEEEEEEEECCCCHHHHCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCC
W
C
>Mature Secondary Structure
MQRARCYLLGESAVVLELEPPVTLASQQRIWGLADRLIHHADILEVIPGMNNLTLLLADP
CCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
HNTALDAIERLQRWWEESESLIPESRDITIPVMYGGEVGPDLADVARHTGMSERQVVECH
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCEEEEEC
AGARYIVYFLGFQPGFSYLGGMPEQLATPRRADPRLVVAPGSVGIGGSQTGIYPLATPGG
CCCEEEEEEEECCCCHHHHCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCC
W
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]