| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is pgm [H]
Identifier: 22125158
GI number: 22125158
Start: 1404611
End: 1406296
Strand: Direct
Name: pgm [H]
Synonym: y1258
Alternate gene names: 22125158
Gene position: 1404611-1406296 (Clockwise)
Preceding gene: 161484841
Following gene: 22125159
Centisome position: 30.53
GC content: 50.53
Gene sequence:
>1686_bases ATGGCAACGCCCTTGCTGAGGACGTGTATAGGAGTAGTGACTGTGGCGAATCACCCTCGGGCTGGGCAACCTGCTCAGCA AAGCGATTTAATTAACGTAGCTCAGTTGACATCGCAATATTATGTATTGCAGCCAGACGCTGAAGACCCCGCTCATGCCG TTAAATTTGGTACTTCCGGCCACCGTGGTAGTTCAGTGCGCCACAGTTTTAATGAAGCTCATATTCTTGCTATCGCGCAG GCGATAGCTGAAGTTCGTCATCAACACGGTATCAGCGGCCCATGCTATGTGGGTAAAGATACCCATGCGCTATCCGAGCC CGCCTTTATTTCGGTGCTGGAAGTGTTGACGGCGAATGGTGTCGATGTTGTCGTACAGCAAGATAATGGTTTTACGCCAA CACCGGCCATTTCCCATGTCATTCTTTGTCATAACGCCCAGGGTAAAGCGTTGGCGGATGGTATTGTCATTACGCCATCC CACAACCCACCGGAAGACGGTGGCATTAAGTACAACCCGCCGAATGGTGGCCCAGCGGATACTAATCTGACGTCCGTGAT TGAAAAGCGGGCTAATCAGTTACTCAGCCAGAATTTAAAGGGTGTTAAGCGCCAAACATTGGATAAAGCCTGGCAGAGCA ATCATCTGCGTGAGCAGGATTTGCTCCAACCTTATGTTGAAGGTTTGGTGGATGTCGTTGATATTCCCGCCATTCAACAA GCAGGGCTGAAGCTCGGTGTGGATCCGCTTGGCGGCTCCGGTATTGCCTACTGGCAGCGCATTGCTGAGTACTACAAGCT GGATTTGACGTTGGTCAATAATGCCATCGATCAGACATTCCGATTTATGCATCTTGATCACGATGGTGTGATCCGCATGG ATTGCTCTTCAGAGTCGGCGATGGCTGGTTTGTTGGCACTGCGCGATAAATTTGATTTAGCTTTTGCTAATGATCCAGAT TACGACCGTCATGGCATTGTGACCCCAGCCGGGTTGATGAATCCGAATCATTATCTCGCGGTATCTATTAATTATCTGTT CCAGCATCGCCCACAATGGGGGGCGGGGGTGGCAGTCGGTAAAACATTGGTTTCCAGTGCGATGATTGATCGGGTTGTGG CTGATTTGGGCCGCAAGCTGGTGGAAGTCCCCGTTGGCTTTAAGTGGTTTGTTGATGGTTTACACGACGGCAGTTTTGGT TTTGGTGGCGAAGAGAGTGCCGGGGCTTCTTTCCTGCGCTTTAATGGCACGCCGTGGTCGACCGATAAAGACGGCATTAT CATGTGTCTGTTGGCGGCAGAAATTACGGCCGTGACCGGTAAGGACCCACAACGTCACTATGATGATTTAGCACAACGCT TTGGTGCGCCAAGTTATAACCGTATTCAGGCGCCGGCAACGCAGGCGCAGAAAAATGCCTTGTCCAGATTGTCACCTGAA ATGGTGAAAGCCAATACACTGGCGGGTGATCCGATCACTGCCCGTTTAACCAATGCCCCAGGGAATGGTGCATCAATTGG TGGCTTGAAAGTGATGACTGAGAACGGCTGGTTTGCCGCTCGCCCATCAGGCACTGAAGAAGCGTACAAAATTTACTGTG AAAGTTTCCTTGGCGCGGAGCATCGCGAAAAAATAGAACAAGAAGCCGTAAAGATTGTCAGCGAAGTGCTGGCTGAGGCG AAATAA
Upstream 100 bases:
>100_bases GGTACAGCACATCATGCTGGCAATGCAGTTCCCGCCGGAGTTGACTGACAAAGTGTGCGGAACTATCTGATTTCATTGAA ACCATCCTCTTTCTCAGCCA
Downstream 100 bases:
>100_bases GCGGGTATATTCCTGTCCTTAAAGACCAACGCTGTAATCTTGGCACTCGATCAATCCGGCACAGGCTCTGTTGCCGGATT TTTTATGTGTTTTTCTTAAT
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 561; Mature: 560
Protein sequence:
>561_residues MATPLLRTCIGVVTVANHPRAGQPAQQSDLINVAQLTSQYYVLQPDAEDPAHAVKFGTSGHRGSSVRHSFNEAHILAIAQ AIAEVRHQHGISGPCYVGKDTHALSEPAFISVLEVLTANGVDVVVQQDNGFTPTPAISHVILCHNAQGKALADGIVITPS HNPPEDGGIKYNPPNGGPADTNLTSVIEKRANQLLSQNLKGVKRQTLDKAWQSNHLREQDLLQPYVEGLVDVVDIPAIQQ AGLKLGVDPLGGSGIAYWQRIAEYYKLDLTLVNNAIDQTFRFMHLDHDGVIRMDCSSESAMAGLLALRDKFDLAFANDPD YDRHGIVTPAGLMNPNHYLAVSINYLFQHRPQWGAGVAVGKTLVSSAMIDRVVADLGRKLVEVPVGFKWFVDGLHDGSFG FGGEESAGASFLRFNGTPWSTDKDGIIMCLLAAEITAVTGKDPQRHYDDLAQRFGAPSYNRIQAPATQAQKNALSRLSPE MVKANTLAGDPITARLTNAPGNGASIGGLKVMTENGWFAARPSGTEEAYKIYCESFLGAEHREKIEQEAVKIVSEVLAEA K
Sequences:
>Translated_561_residues MATPLLRTCIGVVTVANHPRAGQPAQQSDLINVAQLTSQYYVLQPDAEDPAHAVKFGTSGHRGSSVRHSFNEAHILAIAQ AIAEVRHQHGISGPCYVGKDTHALSEPAFISVLEVLTANGVDVVVQQDNGFTPTPAISHVILCHNAQGKALADGIVITPS HNPPEDGGIKYNPPNGGPADTNLTSVIEKRANQLLSQNLKGVKRQTLDKAWQSNHLREQDLLQPYVEGLVDVVDIPAIQQ AGLKLGVDPLGGSGIAYWQRIAEYYKLDLTLVNNAIDQTFRFMHLDHDGVIRMDCSSESAMAGLLALRDKFDLAFANDPD YDRHGIVTPAGLMNPNHYLAVSINYLFQHRPQWGAGVAVGKTLVSSAMIDRVVADLGRKLVEVPVGFKWFVDGLHDGSFG FGGEESAGASFLRFNGTPWSTDKDGIIMCLLAAEITAVTGKDPQRHYDDLAQRFGAPSYNRIQAPATQAQKNALSRLSPE MVKANTLAGDPITARLTNAPGNGASIGGLKVMTENGWFAARPSGTEEAYKIYCESFLGAEHREKIEQEAVKIVSEVLAEA K >Mature_560_residues ATPLLRTCIGVVTVANHPRAGQPAQQSDLINVAQLTSQYYVLQPDAEDPAHAVKFGTSGHRGSSVRHSFNEAHILAIAQA IAEVRHQHGISGPCYVGKDTHALSEPAFISVLEVLTANGVDVVVQQDNGFTPTPAISHVILCHNAQGKALADGIVITPSH NPPEDGGIKYNPPNGGPADTNLTSVIEKRANQLLSQNLKGVKRQTLDKAWQSNHLREQDLLQPYVEGLVDVVDIPAIQQA GLKLGVDPLGGSGIAYWQRIAEYYKLDLTLVNNAIDQTFRFMHLDHDGVIRMDCSSESAMAGLLALRDKFDLAFANDPDY DRHGIVTPAGLMNPNHYLAVSINYLFQHRPQWGAGVAVGKTLVSSAMIDRVVADLGRKLVEVPVGFKWFVDGLHDGSFGF GGEESAGASFLRFNGTPWSTDKDGIIMCLLAAEITAVTGKDPQRHYDDLAQRFGAPSYNRIQAPATQAQKNALSRLSPEM VKANTLAGDPITARLTNAPGNGASIGGLKVMTENGWFAARPSGTEEAYKIYCESFLGAEHREKIEQEAVKIVSEVLAEAK
Specific function: This enzyme participates in both the breakdown and synthesis of glucose [H]
COG id: COG0033
COG function: function code G; Phosphoglucomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI290463102, Length=449, Percent_Identity=25.8351893095768, Blast_Score=93, Evalue=8e-19, Organism=Homo sapiens, GI21361621, Length=442, Percent_Identity=25.5656108597285, Blast_Score=83, Evalue=8e-16, Organism=Homo sapiens, GI133922562, Length=407, Percent_Identity=25.3071253071253, Blast_Score=82, Evalue=2e-15, Organism=Escherichia coli, GI1786904, Length=546, Percent_Identity=82.7838827838828, Blast_Score=937, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6322722, Length=559, Percent_Identity=26.654740608229, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6323752, Length=560, Percent_Identity=23.75, Blast_Score=84, Evalue=4e-17, Organism=Drosophila melanogaster, GI17864244, Length=425, Percent_Identity=27.7647058823529, Blast_Score=98, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005852 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 60526; Mature: 60395
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPLLRTCIGVVTVANHPRAGQPAQQSDLINVAQLTSQYYVLQPDAEDPAHAVKFGTSG CCCHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCHHHEECCCCC HRGSSVRHSFNEAHILAIAQAIAEVRHQHGISGPCYVGKDTHALSEPAFISVLEVLTANG CCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCC VDVVVQQDNGFTPTPAISHVILCHNAQGKALADGIVITPSHNPPEDGGIKYNPPNGGPAD CEEEEECCCCCCCCHHHCEEEEEECCCCCEEECCEEECCCCCCCCCCCEEECCCCCCCCC TNLTSVIEKRANQLLSQNLKGVKRQTLDKAWQSNHLREQDLLQPYVEGLVDVVDIPAIQQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHH AGLKLGVDPLGGSGIAYWQRIAEYYKLDLTLVNNAIDQTFRFMHLDHDGVIRMDCSSESA CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCHH MAGLLALRDKFDLAFANDPDYDRHGIVTPAGLMNPNHYLAVSINYLFQHRPQWGAGVAVG HHHHHHHHHCCCEEECCCCCCCCCCCCCCHHCCCCCCEEEEEEEEHHHCCCCCCCCHHHH KTLVSSAMIDRVVADLGRKLVEVPVGFKWFVDGLHDGSFGFGGEESAGASFLRFNGTPWS HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCCCCCCCCCCCCCCCEEEEECCCCCC TDKDGIIMCLLAAEITAVTGKDPQRHYDDLAQRFGAPSYNRIQAPATQAQKNALSRLSPE CCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHH MVKANTLAGDPITARLTNAPGNGASIGGLKVMTENGWFAARPSGTEEAYKIYCESFLGAE HHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHCCH HREKIEQEAVKIVSEVLAEAK HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATPLLRTCIGVVTVANHPRAGQPAQQSDLINVAQLTSQYYVLQPDAEDPAHAVKFGTSG CCHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCHHHEECCCCC HRGSSVRHSFNEAHILAIAQAIAEVRHQHGISGPCYVGKDTHALSEPAFISVLEVLTANG CCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCC VDVVVQQDNGFTPTPAISHVILCHNAQGKALADGIVITPSHNPPEDGGIKYNPPNGGPAD CEEEEECCCCCCCCHHHCEEEEEECCCCCEEECCEEECCCCCCCCCCCEEECCCCCCCCC TNLTSVIEKRANQLLSQNLKGVKRQTLDKAWQSNHLREQDLLQPYVEGLVDVVDIPAIQQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHH AGLKLGVDPLGGSGIAYWQRIAEYYKLDLTLVNNAIDQTFRFMHLDHDGVIRMDCSSESA CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCHH MAGLLALRDKFDLAFANDPDYDRHGIVTPAGLMNPNHYLAVSINYLFQHRPQWGAGVAVG HHHHHHHHHCCCEEECCCCCCCCCCCCCCHHCCCCCCEEEEEEEEHHHCCCCCCCCHHHH KTLVSSAMIDRVVADLGRKLVEVPVGFKWFVDGLHDGSFGFGGEESAGASFLRFNGTPWS HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCCCCCCCCCCCCCCCEEEEECCCCCC TDKDGIIMCLLAAEITAVTGKDPQRHYDDLAQRFGAPSYNRIQAPATQAQKNALSRLSPE CCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHH MVKANTLAGDPITARLTNAPGNGASIGGLKVMTENGWFAARPSGTEEAYKIYCESFLGAE HHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHCCH HREKIEQEAVKIVSEVLAEAK HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8083177; 8905232; 9278503; 8011018 [H]