| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is 22125130
Identifier: 22125130
GI number: 22125130
Start: 1378470
End: 1378874
Strand: Reverse
Name: 22125130
Synonym: y1229
Alternate gene names: NA
Gene position: 1378874-1378470 (Counterclockwise)
Preceding gene: 22125137
Following gene: 22125129
Centisome position: 29.97
GC content: 43.7
Gene sequence:
>405_bases ATGAGGTTATGCTCAGATTTCGTTATACTGCCGCTGGAAATCGGAAGACGCCATAAAGGAAAAGCAATGACAATGCGTGA GCTTGAAGTACAATTTCTCAAAGCAATGAGTGAGTTGCAGTCAACTTTTGAGAAACAGCATAAGACATGGCAATCAAGCT ATAATGCGTTGCAATATGAGCTGGAACAATCAAAAGCCCGGGAAAGCGCATTGCGGGTGAAGAATGAGATGCTGCTAAGA AAACTCAATACGGCGAATACACTACCGGAACAGCATTCACTGGTCAGGCAAATGAAAATGCTGGGGGCACACCTTGATGC TCTGGCAAAAGATGCTGCCGCGTTTAATCTTCACCTGAATAGTCAGCACAAAAATACTGATAACTTCAGTGGCGATAATA CGTGA
Upstream 100 bases:
>100_bases TATTGGTCGAACCACAATATTGGCTCACCTATAATATCATCGGTTACCCTACAATATCATCGGTTAGCCCACAATCAGGA AGACAAGACAGAGTTGATGG
Downstream 100 bases:
>100_bases GTACTTTGTTGATGTTGTCTATTTATGGCAATCTAATATTTTATGACAATTTAATAACTTATAGCAATTTAATAACTTAT CGCAATTTAACAACTTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MRLCSDFVILPLEIGRRHKGKAMTMRELEVQFLKAMSELQSTFEKQHKTWQSSYNALQYELEQSKARESALRVKNEMLLR KLNTANTLPEQHSLVRQMKMLGAHLDALAKDAAAFNLHLNSQHKNTDNFSGDNT
Sequences:
>Translated_134_residues MRLCSDFVILPLEIGRRHKGKAMTMRELEVQFLKAMSELQSTFEKQHKTWQSSYNALQYELEQSKARESALRVKNEMLLR KLNTANTLPEQHSLVRQMKMLGAHLDALAKDAAAFNLHLNSQHKNTDNFSGDNT >Mature_134_residues MRLCSDFVILPLEIGRRHKGKAMTMRELEVQFLKAMSELQSTFEKQHKTWQSSYNALQYELEQSKARESALRVKNEMLLR KLNTANTLPEQHSLVRQMKMLGAHLDALAKDAAAFNLHLNSQHKNTDNFSGDNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15444; Mature: 15444
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLCSDFVILPLEIGRRHKGKAMTMRELEVQFLKAMSELQSTFEKQHKTWQSSYNALQYE CCCCCCCEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEQSKARESALRVKNEMLLRKLNTANTLPEQHSLVRQMKMLGAHLDALAKDAAAFNLHLN HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC SQHKNTDNFSGDNT CCCCCCCCCCCCCC >Mature Secondary Structure MRLCSDFVILPLEIGRRHKGKAMTMRELEVQFLKAMSELQSTFEKQHKTWQSSYNALQYE CCCCCCCEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEQSKARESALRVKNEMLLRKLNTANTLPEQHSLVRQMKMLGAHLDALAKDAAAFNLHLN HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC SQHKNTDNFSGDNT CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA