| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is ccrB [H]
Identifier: 22125071
GI number: 22125071
Start: 1313818
End: 1314207
Strand: Reverse
Name: ccrB [H]
Synonym: y1168
Alternate gene names: 22125071
Gene position: 1314207-1313818 (Counterclockwise)
Preceding gene: 22125074
Following gene: 22125068
Centisome position: 28.57
GC content: 47.18
Gene sequence:
>390_bases GTGCCTATGTTTAATACATTACTTGCAGTGTTTATTGGTGGCGGTGTGGGCAGCATGGCCCGTTGGTTGGTCAGTTTGAA GTTAAACAGTGCATCGGCTCACTTACCGGTAGGTACGCTTATTGTCAACCTGGTCGGTGCCTTTATTATTGGCCTGACAC TGGCGTTTTTTAGCCGAATGACTCATATTGATCCCGTTTGGAAGCTACTGATTACCACCGGTTTTTGTGGGGGCCTCACG ACGTTCTCCACCTTTTCTGTCGAAGTGGTCTATCTAATCCAAGAGGGAAAATTAGCGTGGGCTGCCGGAACAATTTTGCT CAATGTGGCGGGTTCACTGGCAATGACGATGCTGGCTTTTATATTGGTCAATAACTTTGCCAGCCAATAA
Upstream 100 bases:
>100_bases GTGACCTTCTCATTAGGGTACGTAGGGCTACCAACGAGCCTTTCTGAAAAGATTTACGGGTAAACAAAACGCCCCAATGG TCAGTATCTGTTAGAGAAAA
Downstream 100 bases:
>100_bases TGGCTAGTGGCCTATGATTAAACACTTCAAGGAGTGAATAGCGTGGCTATGGTGTTTATTCAGTAGAAAATAGTGCTACT AATAATATCGCCTTAATGTT
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MPMFNTLLAVFIGGGVGSMARWLVSLKLNSASAHLPVGTLIVNLVGAFIIGLTLAFFSRMTHIDPVWKLLITTGFCGGLT TFSTFSVEVVYLIQEGKLAWAAGTILLNVAGSLAMTMLAFILVNNFASQ
Sequences:
>Translated_129_residues MPMFNTLLAVFIGGGVGSMARWLVSLKLNSASAHLPVGTLIVNLVGAFIIGLTLAFFSRMTHIDPVWKLLITTGFCGGLT TFSTFSVEVVYLIQEGKLAWAAGTILLNVAGSLAMTMLAFILVNNFASQ >Mature_128_residues PMFNTLLAVFIGGGVGSMARWLVSLKLNSASAHLPVGTLIVNLVGAFIIGLTLAFFSRMTHIDPVWKLLITTGFCGGLTT FSTFSVEVVYLIQEGKLAWAAGTILLNVAGSLAMTMLAFILVNNFASQ
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
Organism=Escherichia coli, GI1786842, Length=120, Percent_Identity=65, Blast_Score=158, Evalue=9e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 13712; Mature: 13580
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMFNTLLAVFIGGGVGSMARWLVSLKLNSASAHLPVGTLIVNLVGAFIIGLTLAFFSRM CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH THIDPVWKLLITTGFCGGLTTFSTFSVEVVYLIQEGKLAWAAGTILLNVAGSLAMTMLAF HCCCHHHHHHHHHCCCCCHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH ILVNNFASQ HHHHHHCCC >Mature Secondary Structure PMFNTLLAVFIGGGVGSMARWLVSLKLNSASAHLPVGTLIVNLVGAFIIGLTLAFFSRM CHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH THIDPVWKLLITTGFCGGLTTFSTFSVEVVYLIQEGKLAWAAGTILLNVAGSLAMTMLAF HCCCHHHHHHHHHCCCCCHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH ILVNNFASQ HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]