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The map label for this gene is sfsB [H]

Identifier: 22125044

GI number: 22125044

Start: 1280540

End: 1280842

Strand: Direct

Name: sfsB [H]

Synonym: y1140

Alternate gene names: 22125044

Gene position: 1280540-1280842 (Clockwise)

Preceding gene: 22125040

Following gene: 22125046

Centisome position: 27.83

GC content: 48.18

Gene sequence:

>303_bases
ATGTTTTTCAGAGCATGGGATAATTACCCGAACACATCAGATGGAGGGGTAAACGTTATGGATAAACAAGATTGGCATCC
GGCAGATATTTTGGCGGGGTTGAAAAAACGGGGTACGACGATGGCGGCTCTTTCCAGAAAATCGGGGCTGGCCTCTTCAA
CGCTAGCGAATACGCTATTACGCCCTTGGCCGAAAGGCGAAAGATTGATTGCAGAGGTGCTGGAGTTACACCCTGCGGAA
ATTTGGCCGTCACGTTATCTAAAACCTAAAAAATCACCCGCAGAGTCAGTTAATCCAGGCTGA

Upstream 100 bases:

>100_bases
ATAATAGAGACACTCGCAGCCATTAAAGCTAATCCTATAAGCAGGGATACCATACAAATCCCATTAAGATCTCTATAACC
TAAAAATATCCTGTTTTGGG

Downstream 100 bases:

>100_bases
TTCCGTTTATTGAAAAGGATAATAAAAACGCGAGATTGCTGCCCCACAATGGTGTGACCTGTGGGGCTTTTTTGATCCCC
TTCACATGTGACGCGGCAAG

Product: regulator

Products: NA

Alternate protein names: Ner-like protein [H]

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MFFRAWDNYPNTSDGGVNVMDKQDWHPADILAGLKKRGTTMAALSRKSGLASSTLANTLLRPWPKGERLIAEVLELHPAE
IWPSRYLKPKKSPAESVNPG

Sequences:

>Translated_100_residues
MFFRAWDNYPNTSDGGVNVMDKQDWHPADILAGLKKRGTTMAALSRKSGLASSTLANTLLRPWPKGERLIAEVLELHPAE
IWPSRYLKPKKSPAESVNPG
>Mature_100_residues
MFFRAWDNYPNTSDGGVNVMDKQDWHPADILAGLKKRGTTMAALSRKSGLASSTLANTLLRPWPKGERLIAEVLELHPAE
IWPSRYLKPKKSPAESVNPG

Specific function: This protein is involved in positive regulation of the metabolism of sugars [H]

COG id: COG3423

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ner transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI1789579, Length=67, Percent_Identity=67.1641791044776, Blast_Score=96, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010982 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11101; Mature: 11101

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFRAWDNYPNTSDGGVNVMDKQDWHPADILAGLKKRGTTMAALSRKSGLASSTLANTLL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHH
RPWPKGERLIAEVLELHPAEIWPSRYLKPKKSPAESVNPG
CCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFFRAWDNYPNTSDGGVNVMDKQDWHPADILAGLKKRGTTMAALSRKSGLASSTLANTLL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHH
RPWPKGERLIAEVLELHPAEIWPSRYLKPKKSPAESVNPG
CCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]