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The map label for this gene is cysS [H]

Identifier: 22125011

GI number: 22125011

Start: 1245716

End: 1247146

Strand: Direct

Name: cysS [H]

Synonym: y1107

Alternate gene names: 22125011

Gene position: 1245716-1247146 (Clockwise)

Preceding gene: 22125008

Following gene: 22125012

Centisome position: 27.08

GC content: 49.48

Gene sequence:

>1431_bases
TTGTTTATCTATGCGTACCGCAAAATAAAACCACGGAATGTCCCAATGCTAAAGATTTTTAATACACTGAGTCGCCAAAA
AGAGGAATTCAAGCCTATCCATGCCGGTAAAGTGGGTATGTATGTATGCGGGATCACTATTTATGACCTGTGTCACATTG
GGCATGGGCGCACTTTTGTCGCTTTCGATGTTGTGGCGCGTTATTTGCGTTATTTAGGTTACTCTCTGACGTATGTCCGC
AATGTCACTGACGTTGACGATAAGATCATTAAACGTGCGATTGAGAATAATGAGACTTGTGAGCAACTGACAACGCGGAT
GCTGGCAGAGATGCACAAAGATTTTGACGCATTAAATCTTGAGCGCCCTGATTTGGAGCCGCGTGCGACTCACCATATCG
CTGAAATAATTGAGATGACCGAGCGCTTAATTGCTCGGGGCCATGCTTATGTTGCCTCTAACGGCGATGTGATGTTTGCG
GTCGATAGCGATCCTGATTACGGTGTGTTATCCCGACAGGATCTGGATCAACTACAGGCCGGTGCACGGGTTGAAGTGGC
TGATGTTAAACGTAATCCGATGGATTTCGTGCTGTGGAAAATGTCCAAACCGGGTGAGCCACGCTGGGAATCACCTTGGG
GGCCGGGCCGCCCTGGTTGGCATATTGAATGTTCAGCAATGAACGGCAAACAGTTAGGCGCGCATTTTGATATTCACGGC
GGCGGCTCTGATTTGATGTTTCCGCACCACGAGAACGAGATCGCTCAATCTACCTGCGCACACGATGGCCCGTATGTAAA
TTACTGGATGCACTCTGGTATGGTGATGATCGACAAAGAGAAAATGTCGAAGTCCCTGAATAACTTCTTCACTATTCGCG
ATGTGCTGGCGTATTACGATGCCGAAACCGTGCGTTATTTCTTGATGTCCGGTCATTATCGTAGCCAGCTTAACTACAGC
GAAGAGAATCTGAAGCAGGCACGCGCTTCACTGGAGCGTTTATATACCGCGCTGCGCGGTACTGATGCTAACGCTACGCC
AGCAGGGGGCGCTGAATTTGAAGCCCGTTTCCGCACGGCAATGGATGATGATTTCAATACACCAGAAGCCTATTCGGTGC
TGTTTGACATCGCCCGCGAAGTCAACCGCCTGAAAAACGAAGATATGGCCGCTGCCAATGGTCTGGCCGCTGAGTTACGT
AAATTGGCTCAGGTGCTGGGCTTATTAGAACAGGACCCAGAACTGTTTTTACAAGGCGGTGCGCAGGCTGATGACGACGA
AGTAGCAAAAATCGAAGCCCTGATTAAGCAACGTAATGATGCCCGCAGCAGCAAAAATTGGGCGTTGGCAGATGCCGCAC
GTGATCAATTGAATGAACTGGGTATTGTGCTGGAAGATGGCCCGCAAGGCACGACATGGCGCCGCAAGTAA

Upstream 100 bases:

>100_bases
ATATCATATCTCTGAGATTGAGTCAGTACTCGTTCTGCTGCCTTTATGGGCGAAAAAGTGCTGTATCAGAGACTGATTTA
CCGCATAATCTGATGATATC

Downstream 100 bases:

>100_bases
CGTTGTTTGATACGCTTTTAAGGTTATGGAATAAGGCGGGATAGGGAACTGTTTAGCGAGCTATATTTGTTAGCTGACAC
TATTTATTAGTGGGTACTAT

Product: cysteinyl-tRNA synthetase

Products: NA

Alternate protein names: Cysteine--tRNA ligase; CysRS [H]

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MFIYAYRKIKPRNVPMLKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSLTYVR
NVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEIIEMTERLIARGHAYVASNGDVMFA
VDSDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHG
GGSDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQLNYS
EENLKQARASLERLYTALRGTDANATPAGGAEFEARFRTAMDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELR
KLAQVLGLLEQDPELFLQGGAQADDDEVAKIEALIKQRNDARSSKNWALADAARDQLNELGIVLEDGPQGTTWRRK

Sequences:

>Translated_476_residues
MFIYAYRKIKPRNVPMLKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSLTYVR
NVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEIIEMTERLIARGHAYVASNGDVMFA
VDSDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHG
GGSDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQLNYS
EENLKQARASLERLYTALRGTDANATPAGGAEFEARFRTAMDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELR
KLAQVLGLLEQDPELFLQGGAQADDDEVAKIEALIKQRNDARSSKNWALADAARDQLNELGIVLEDGPQGTTWRRK
>Mature_476_residues
MFIYAYRKIKPRNVPMLKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSLTYVR
NVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEIIEMTERLIARGHAYVASNGDVMFA
VDSDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHG
GGSDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQLNYS
EENLKQARASLERLYTALRGTDANATPAGGAEFEARFRTAMDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELR
KLAQVLGLLEQDPELFLQGGAQADDDEVAKIEALIKQRNDARSSKNWALADAARDQLNELGIVLEDGPQGTTWRRK

Specific function: Unknown

COG id: COG0215

COG function: function code J; Cysteinyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI13375695, Length=482, Percent_Identity=36.0995850622407, Blast_Score=256, Evalue=5e-68,
Organism=Homo sapiens, GI62240992, Length=260, Percent_Identity=40, Blast_Score=192, Evalue=4e-49,
Organism=Homo sapiens, GI10835051, Length=260, Percent_Identity=40, Blast_Score=192, Evalue=4e-49,
Organism=Homo sapiens, GI303304987, Length=260, Percent_Identity=40, Blast_Score=192, Evalue=5e-49,
Organism=Homo sapiens, GI21269877, Length=260, Percent_Identity=40, Blast_Score=192, Evalue=5e-49,
Organism=Escherichia coli, GI1786737, Length=461, Percent_Identity=83.9479392624729, Blast_Score=800, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17509797, Length=237, Percent_Identity=40.084388185654, Blast_Score=175, Evalue=6e-44,
Organism=Caenorhabditis elegans, GI17509795, Length=237, Percent_Identity=40.084388185654, Blast_Score=175, Evalue=6e-44,
Organism=Saccharomyces cerevisiae, GI6324082, Length=413, Percent_Identity=31.4769975786925, Blast_Score=202, Evalue=8e-53,
Organism=Drosophila melanogaster, GI19922218, Length=500, Percent_Identity=34.8, Blast_Score=254, Evalue=1e-67,
Organism=Drosophila melanogaster, GI19922364, Length=260, Percent_Identity=38.8461538461538, Blast_Score=178, Evalue=9e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015803
- InterPro:   IPR015273
- InterPro:   IPR014729
- InterPro:   IPR009080 [H]

Pfam domain/function: PF09190 DALR_2; PF01406 tRNA-synt_1e [H]

EC number: =6.1.1.16 [H]

Molecular weight: Translated: 54041; Mature: 54041

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIYAYRKIKPRNVPMLKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFV
CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEH
AFDVVARYLRYLGYSLTYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNL
HHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
ERPDLEPRATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCHHHHHHHHC
GARVEVADVKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHG
CCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECC
GGSDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYD
CCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRTA
HHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
MDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQGG
CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECC
AQADDDEVAKIEALIKQRNDARSSKNWALADAARDQLNELGIVLEDGPQGTTWRRK
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MFIYAYRKIKPRNVPMLKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFV
CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEH
AFDVVARYLRYLGYSLTYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNL
HHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
ERPDLEPRATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCHHHHHHHHC
GARVEVADVKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHG
CCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECC
GGSDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYD
CCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRTA
HHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
MDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQGG
CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECC
AQADDDEVAKIEALIKQRNDARSSKNWALADAARDQLNELGIVLEDGPQGTTWRRK
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA