Definition Yersinia pestis KIM 10 chromosome, complete genome.
Accession NC_004088
Length 4,600,755

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The map label for this gene is ybbP [H]

Identifier: 22125005

GI number: 22125005

Start: 1239957

End: 1242398

Strand: Direct

Name: ybbP [H]

Synonym: y1101

Alternate gene names: 22125005

Gene position: 1239957-1242398 (Clockwise)

Preceding gene: 22125004

Following gene: 22125008

Centisome position: 26.95

GC content: 54.71

Gene sequence:

>2442_bases
GTGGGAGGAGTCATGATTTGGCGCTGGTTTTGGCGTGAGTGGCGCGCGCCTTCACTGCTCATTGTCTGGCTGGCGCTCAC
GCTGGCAGTAGCCTGCGTATTGGCGTTAGGGACTATCAGCGATCGAATGGAAAAAGGGCTGAGTCAGCAAAGCCGCGATT
TTCTGGCCGGTGATCGGGTTCTCCGGGCGGCACACCCTGTTCCAGAGGCGTGGTTACAGGAAGCGAAGCAGCAGGGGCTG
GCGGTTAGCCGCCAACTCTCATTTTTGACCATGACCTTTGCCGGTGATCGCCCACAGTTGGCTGAGGTGAAAGCCACTGA
TCTGGCCTACCCGCTCTATGGGAAATTAGAAACCTTACCTAAGGGGGCAGAGTTGCAACCGGGCACGGTGCTGGTGGCAC
CGCGATTACTGGCGCTACTGGGGGTTAAGGTTGGCGACATGTTGGATGTTGGCGATACCTCGCTAAAAATTATCGGTGAG
ATTATTCAAGAACCCGATGCCGGTTTTAATCCGTTTCAAACCGCACCACACATTCTGATCAATCTGGCTGATGTCGAGAA
AACCGGTGCGGTGCAACCGGGTAGCCGTTTGACTTACCGCTATATGTTTGCTGGCACCCCGGAGGCCGTGACGCAGTTTA
GCGACTGGCTCACCCCGCAATTAGCACCAGAGCAGCGTTGGTATGGCTTGCAAGAATCCGGTGGCGCATTGGGGAAATCC
CTGCAACGGGCGCAACAGTTCTTATTATTATCGGCGTTGCTGACCTTATTGCTGTCGATTGCTGCGGTCGCCGTCGCTAT
GGGCCACTATTGCCGCAGCCGCTATGATCTGGTGGCTGTGCTGAAAACATTGGGGGCCGGGCGCGGTGCTCTGCGTCGAT
TGATTATCGGCCAATGGCTATCCGTGCTGGCATTGGCCGGCCTCTGCGGCAGTGTCATTGGTCTCTTATTTGAGAGGCTA
TTGGTTTGGTTATTAGCGCCGGTATTGCCCGCAGAGTTACCCACTGCCGGGCTATGGCCATGGGTGTGGTCAATGGGATC
ATTAGTATTGATTTCGTTGCTGGTGGGGGTGAGGCCATATCGGCAATTACTCGCCACTCAGCCATTGCGGGTATTGCGCC
GTGATGTGGCGGCCAATGTCTGGCCATTGCGCTATTTTATTCCAGTGATGCTGCTGGTGGTGATTGGGTTATTGGCATTG
CTGATGGGGGGGAACTCCCTGCTATGGGCCATTCTGGGGGGCATGGTGGTATTGGCGTTGCTGCTCGGGGGGATCGGCTG
GGGCAGCTTGCTGTTGCTGCGTCACCTAACGGTAACCCGTTTATCACTGCGGTTGGCCATTAATCGGCTTCTGCGCCAAC
CGTGGATGACGCTGACTCAGCTTGCGGCATTTTCACTCTCCTTCATGTTGTTGGCGTTGTTACTAGTGCTACGTGGTGAT
CTCTTGGAGAGATGGCAGCAGCAATTGCCACCGGATAGCCCGAACTATTTTTTGCTGAATATGACGCCCCAGCAGGTACC
ACAAGTCACGGCATTTTTGGCTCAGCATCATATTCAACCCTCGACGTTCTACCCCATTGTGCGGGTCCGGTTGACGGAAA
TTAATCAGCAACTGGCTACTGAGCGAGTGAGTGAAGACTCACCCGGTGGTGAGGCAGTTAACCGTGAGTTGAATTTAACC
TGGCAGCAGGATTTACCCGCTCATAATGTATTGACCGCAGGGCAGTGGCCTCCTAAAGCCGATGAAGTCTCGATGGAGCA
GGGGATTGCCGATCGGCTGGGGATTAAAATTGGCGATAAACTGACTTTCAGCGGTGATACTCAGTCATTTGGGGCGACGG
TCAGCAGTATCCGTCAGGTTGATTGGGACAGTTTACGGCCTAATTTTTACTTTATTTTCCCACCCGGCGCATTGGATCAA
CAACCACAAACCTGGTTGACCAGCTTCCGCTATCACGGTGATGGAGAGGCTTTGGTTCAGTTAAATCGCCAGTTCCCAAC
ACTGAGTTTGTTAGACATCGGTGCGATGTTGAAACAGGTTGGTCAAGTGTTACAACAGGTCAGCCGGGCGCTGGAAGTGA
TGGTGGTGTTGGTGATTCTGTGTGGCACCTTATTGCTACTGGCACAGGTACAAGTGGGGATGCGCCAGCGTAGGCAGGAG
TTGGTGGTCTACCGCACGCTCGGAGCGAGTAAACGCTTACTTCGAGGCACATTATGGTGGGAATTTGCTTTACTGGGCTT
GGTAGCGGGGCTGGCGGCGGCGATAGGTGCTGAAGCCGCGCTCTGGGCATTGCAGAGGTTAGTCTTTGATTTCCCATGGC
AGCCAAACTGGATGATGTGGTGGATCTTACCCCTGGCGGGGGCGTCGTTGCTGTCAGTGTGCGGTGGCTGGCTAGGGGTT
CGGCTATTACGAGGGCAGGCGCTATTTCGTCGTTACGAGTAG

Upstream 100 bases:

>100_bases
CCCTAAACCGGGATTTCGCGACCACGTTGATTCTGGTCACACATGATGAACAACTGGCCGGTCGTTGTCAGCGTCGGTTG
CGCCTGAGGGACGGTAAATT

Downstream 100 bases:

>100_bases
TGGATTTTATTCGCGGGCAGCAGCAGAGGCCGCCCGCTTCTTGTTATAACTTATCTTGCGCCCAACGCAGTGCGTTCTGA
TACTCCGCGGGTAGCAAAGG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 813; Mature: 812

Protein sequence:

>813_residues
MGGVMIWRWFWREWRAPSLLIVWLALTLAVACVLALGTISDRMEKGLSQQSRDFLAGDRVLRAAHPVPEAWLQEAKQQGL
AVSRQLSFLTMTFAGDRPQLAEVKATDLAYPLYGKLETLPKGAELQPGTVLVAPRLLALLGVKVGDMLDVGDTSLKIIGE
IIQEPDAGFNPFQTAPHILINLADVEKTGAVQPGSRLTYRYMFAGTPEAVTQFSDWLTPQLAPEQRWYGLQESGGALGKS
LQRAQQFLLLSALLTLLLSIAAVAVAMGHYCRSRYDLVAVLKTLGAGRGALRRLIIGQWLSVLALAGLCGSVIGLLFERL
LVWLLAPVLPAELPTAGLWPWVWSMGSLVLISLLVGVRPYRQLLATQPLRVLRRDVAANVWPLRYFIPVMLLVVIGLLAL
LMGGNSLLWAILGGMVVLALLLGGIGWGSLLLLRHLTVTRLSLRLAINRLLRQPWMTLTQLAAFSLSFMLLALLLVLRGD
LLERWQQQLPPDSPNYFLLNMTPQQVPQVTAFLAQHHIQPSTFYPIVRVRLTEINQQLATERVSEDSPGGEAVNRELNLT
WQQDLPAHNVLTAGQWPPKADEVSMEQGIADRLGIKIGDKLTFSGDTQSFGATVSSIRQVDWDSLRPNFYFIFPPGALDQ
QPQTWLTSFRYHGDGEALVQLNRQFPTLSLLDIGAMLKQVGQVLQQVSRALEVMVVLVILCGTLLLLAQVQVGMRQRRQE
LVVYRTLGASKRLLRGTLWWEFALLGLVAGLAAAIGAEAALWALQRLVFDFPWQPNWMMWWILPLAGASLLSVCGGWLGV
RLLRGQALFRRYE

Sequences:

>Translated_813_residues
MGGVMIWRWFWREWRAPSLLIVWLALTLAVACVLALGTISDRMEKGLSQQSRDFLAGDRVLRAAHPVPEAWLQEAKQQGL
AVSRQLSFLTMTFAGDRPQLAEVKATDLAYPLYGKLETLPKGAELQPGTVLVAPRLLALLGVKVGDMLDVGDTSLKIIGE
IIQEPDAGFNPFQTAPHILINLADVEKTGAVQPGSRLTYRYMFAGTPEAVTQFSDWLTPQLAPEQRWYGLQESGGALGKS
LQRAQQFLLLSALLTLLLSIAAVAVAMGHYCRSRYDLVAVLKTLGAGRGALRRLIIGQWLSVLALAGLCGSVIGLLFERL
LVWLLAPVLPAELPTAGLWPWVWSMGSLVLISLLVGVRPYRQLLATQPLRVLRRDVAANVWPLRYFIPVMLLVVIGLLAL
LMGGNSLLWAILGGMVVLALLLGGIGWGSLLLLRHLTVTRLSLRLAINRLLRQPWMTLTQLAAFSLSFMLLALLLVLRGD
LLERWQQQLPPDSPNYFLLNMTPQQVPQVTAFLAQHHIQPSTFYPIVRVRLTEINQQLATERVSEDSPGGEAVNRELNLT
WQQDLPAHNVLTAGQWPPKADEVSMEQGIADRLGIKIGDKLTFSGDTQSFGATVSSIRQVDWDSLRPNFYFIFPPGALDQ
QPQTWLTSFRYHGDGEALVQLNRQFPTLSLLDIGAMLKQVGQVLQQVSRALEVMVVLVILCGTLLLLAQVQVGMRQRRQE
LVVYRTLGASKRLLRGTLWWEFALLGLVAGLAAAIGAEAALWALQRLVFDFPWQPNWMMWWILPLAGASLLSVCGGWLGV
RLLRGQALFRRYE
>Mature_812_residues
GGVMIWRWFWREWRAPSLLIVWLALTLAVACVLALGTISDRMEKGLSQQSRDFLAGDRVLRAAHPVPEAWLQEAKQQGLA
VSRQLSFLTMTFAGDRPQLAEVKATDLAYPLYGKLETLPKGAELQPGTVLVAPRLLALLGVKVGDMLDVGDTSLKIIGEI
IQEPDAGFNPFQTAPHILINLADVEKTGAVQPGSRLTYRYMFAGTPEAVTQFSDWLTPQLAPEQRWYGLQESGGALGKSL
QRAQQFLLLSALLTLLLSIAAVAVAMGHYCRSRYDLVAVLKTLGAGRGALRRLIIGQWLSVLALAGLCGSVIGLLFERLL
VWLLAPVLPAELPTAGLWPWVWSMGSLVLISLLVGVRPYRQLLATQPLRVLRRDVAANVWPLRYFIPVMLLVVIGLLALL
MGGNSLLWAILGGMVVLALLLGGIGWGSLLLLRHLTVTRLSLRLAINRLLRQPWMTLTQLAAFSLSFMLLALLLVLRGDL
LERWQQQLPPDSPNYFLLNMTPQQVPQVTAFLAQHHIQPSTFYPIVRVRLTEINQQLATERVSEDSPGGEAVNRELNLTW
QQDLPAHNVLTAGQWPPKADEVSMEQGIADRLGIKIGDKLTFSGDTQSFGATVSSIRQVDWDSLRPNFYFIFPPGALDQQ
PQTWLTSFRYHGDGEALVQLNRQFPTLSLLDIGAMLKQVGQVLQQVSRALEVMVVLVILCGTLLLLAQVQVGMRQRRQEL
VVYRTLGASKRLLRGTLWWEFALLGLVAGLAAAIGAEAALWALQRLVFDFPWQPNWMMWWILPLAGASLLSVCGGWLGVR
LLRGQALFRRYE

Specific function: Unknown

COG id: COG3127

COG function: function code Q; Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1786704, Length=808, Percent_Identity=68.6881188118812, Blast_Score=1046, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 90137; Mature: 90005

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGVMIWRWFWREWRAPSLLIVWLALTLAVACVLALGTISDRMEKGLSQQSRDFLAGDRV
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRAAHPVPEAWLQEAKQQGLAVSRQLSFLTMTFAGDRPQLAEVKATDLAYPLYGKLETLP
HHHCCCCCHHHHHHHHHCCCHHHHHHHHEEEEECCCCCCHHHHHHHHCCCCCCCCHHCCC
KGAELQPGTVLVAPRLLALLGVKVGDMLDVGDTSLKIIGEIIQEPDAGFNPFQTAPHILI
CCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHEE
NLADVEKTGAVQPGSRLTYRYMFAGTPEAVTQFSDWLTPQLAPEQRWYGLQESGGALGKS
EHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHH
LQRAQQFLLLSALLTLLLSIAAVAVAMGHYCRSRYDLVAVLKTLGAGRGALRRLIIGQWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SVLALAGLCGSVIGLLFERLLVWLLAPVLPAELPTAGLWPWVWSMGSLVLISLLVGVRPY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH
RQLLATQPLRVLRRDVAANVWPLRYFIPVMLLVVIGLLALLMGGNSLLWAILGGMVVLAL
HHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LLGGIGWGSLLLLRHLTVTRLSLRLAINRLLRQPWMTLTQLAAFSLSFMLLALLLVLRGD
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLERWQQQLPPDSPNYFLLNMTPQQVPQVTAFLAQHHIQPSTFYPIVRVRLTEINQQLAT
HHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ERVSEDSPGGEAVNRELNLTWQQDLPAHNVLTAGQWPPKADEVSMEQGIADRLGIKIGDK
HHHCCCCCCCHHHCCCCCEEECCCCCCCCCEECCCCCCCCCHHHHHHCHHHHCCCEECCE
LTFSGDTQSFGATVSSIRQVDWDSLRPNFYFIFPPGALDQQPQTWLTSFRYHGDGEALVQ
EEECCCCHHHHHHHHHHHHCCHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHH
LNRQFPTLSLLDIGAMLKQVGQVLQQVSRALEVMVVLVILCGTLLLLAQVQVGMRQRRQE
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVVYRTLGASKRLLRGTLWWEFALLGLVAGLAAAIGAEAALWALQRLVFDFPWQPNWMMW
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEE
WILPLAGASLLSVCGGWLGVRLLRGQALFRRYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GGVMIWRWFWREWRAPSLLIVWLALTLAVACVLALGTISDRMEKGLSQQSRDFLAGDRV
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRAAHPVPEAWLQEAKQQGLAVSRQLSFLTMTFAGDRPQLAEVKATDLAYPLYGKLETLP
HHHCCCCCHHHHHHHHHCCCHHHHHHHHEEEEECCCCCCHHHHHHHHCCCCCCCCHHCCC
KGAELQPGTVLVAPRLLALLGVKVGDMLDVGDTSLKIIGEIIQEPDAGFNPFQTAPHILI
CCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHEE
NLADVEKTGAVQPGSRLTYRYMFAGTPEAVTQFSDWLTPQLAPEQRWYGLQESGGALGKS
EHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHH
LQRAQQFLLLSALLTLLLSIAAVAVAMGHYCRSRYDLVAVLKTLGAGRGALRRLIIGQWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SVLALAGLCGSVIGLLFERLLVWLLAPVLPAELPTAGLWPWVWSMGSLVLISLLVGVRPY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH
RQLLATQPLRVLRRDVAANVWPLRYFIPVMLLVVIGLLALLMGGNSLLWAILGGMVVLAL
HHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LLGGIGWGSLLLLRHLTVTRLSLRLAINRLLRQPWMTLTQLAAFSLSFMLLALLLVLRGD
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLERWQQQLPPDSPNYFLLNMTPQQVPQVTAFLAQHHIQPSTFYPIVRVRLTEINQQLAT
HHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ERVSEDSPGGEAVNRELNLTWQQDLPAHNVLTAGQWPPKADEVSMEQGIADRLGIKIGDK
HHHCCCCCCCHHHCCCCCEEECCCCCCCCCEECCCCCCCCCHHHHHHCHHHHCCCEECCE
LTFSGDTQSFGATVSSIRQVDWDSLRPNFYFIFPPGALDQQPQTWLTSFRYHGDGEALVQ
EEECCCCHHHHHHHHHHHHCCHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHH
LNRQFPTLSLLDIGAMLKQVGQVLQQVSRALEVMVVLVILCGTLLLLAQVQVGMRQRRQE
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVVYRTLGASKRLLRGTLWWEFALLGLVAGLAAAIGAEAALWALQRLVFDFPWQPNWMMW
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEE
WILPLAGASLLSVCGGWLGVRLLRGQALFRRYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]