| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22124984
Identifier: 22124984
GI number: 22124984
Start: 1213881
End: 1214930
Strand: Direct
Name: 22124984
Synonym: y1078
Alternate gene names: NA
Gene position: 1213881-1214930 (Clockwise)
Preceding gene: 22124983
Following gene: 22124985
Centisome position: 26.38
GC content: 35.33
Gene sequence:
>1050_bases TTGAGTATTAATTTGCAAGTTAATTATAGGTTCTCTATGAAAATTATTTATGATGGAATAATTAATTCATTGCAAAATAT GGGAGGGGTAACTGTCTATTTCTCGGAGTTAGTGAGTCGACTTCCTGCAACAGATTTTTATTGGTACTCATACGCAGATG AAATATCTGGTTTCGGTGTTGGTAATGTTAAAATAAAATCTAGACTTTTAGAGCGATATAGGAATTTCTCATTAGATACT ATTAATTATAATTCTCTTTCTGTATTTCATTCATCATATTACCGATTACCAGATTTTGACATTCCGATAGTTACAACAGT TCATGATTTCACATATGAAAAGTTTGTTAATGGCCCTGCAAAATGGGTGCATTCCTGGCAGAAAAACCGTGCGGTTAACA ATAGTGATTTAATTATTTGTGTTTCGGAAAATACAGCTAAAGATTTGCAAATGTATTGCTCAGTTCCTAGCAATAAAATC AGAGTGATATATAACGGTGTGTCAGATAAATATCATTATATTAAGGGTGTTAAAATAACCACAAATAAAGTTATTTTTGT TGGTGCACGTGGTGGTTATAAGAATTTTGACATTGCAGTGAAAGCAATATCAAAAACACCTCACCTCGAATTATCAGTTG TAGGTGGAGGGGCATTCACTAGTAAAGAACTGTCACTACTGAATCACTATTTACCTGGTCGCTACCATGGATTAGGTCGC CTTAGTGATGAGGCTTTGAATGAGGCATATAATTCAGCTTATGCGCTGCTTTACCCATCTAGCTATGAGGGTTTTGGTAT TCCAATATTAGAAGCGATGAGTGCAGGATGTCCCGTAATATCTGTTAATGTATCTTCTATACCTGAGGTCGCAGGTGATG CCGCTATATTAGTGCAAAAACCGACTATTGATGAACTAGTTGACGGCTTGCTTGCCGTAGAAAGTGAAAGGTCTAAACTT ATTGGCTATGGCATGAAGCAAGCGGCTAAATTCTCATGGGATAAGTGTTATCAAGAAACCTTAGATGTTTATAAAGAATT GAACAAATAA
Upstream 100 bases:
>100_bases TTAATTTTTATATATTATAAGTGAGTGAGTTATATTTTGCGATTAGATAATAATTTATTAATTTCTTAACACTACGTTTG ATGTTTAGTAGTGAACTATA
Downstream 100 bases:
>100_bases AATGGATTACAATATATGACTAAGATTGCGCTCATTACTGGTATTACAGGACAAGATGGCTCTTATTTGGCCGAGTTTTT ATTAGAAAAGGGTTATGAGG
Product: mannosyltransferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MSINLQVNYRFSMKIIYDGIINSLQNMGGVTVYFSELVSRLPATDFYWYSYADEISGFGVGNVKIKSRLLERYRNFSLDT INYNSLSVFHSSYYRLPDFDIPIVTTVHDFTYEKFVNGPAKWVHSWQKNRAVNNSDLIICVSENTAKDLQMYCSVPSNKI RVIYNGVSDKYHYIKGVKITTNKVIFVGARGGYKNFDIAVKAISKTPHLELSVVGGGAFTSKELSLLNHYLPGRYHGLGR LSDEALNEAYNSAYALLYPSSYEGFGIPILEAMSAGCPVISVNVSSIPEVAGDAAILVQKPTIDELVDGLLAVESERSKL IGYGMKQAAKFSWDKCYQETLDVYKELNK
Sequences:
>Translated_349_residues MSINLQVNYRFSMKIIYDGIINSLQNMGGVTVYFSELVSRLPATDFYWYSYADEISGFGVGNVKIKSRLLERYRNFSLDT INYNSLSVFHSSYYRLPDFDIPIVTTVHDFTYEKFVNGPAKWVHSWQKNRAVNNSDLIICVSENTAKDLQMYCSVPSNKI RVIYNGVSDKYHYIKGVKITTNKVIFVGARGGYKNFDIAVKAISKTPHLELSVVGGGAFTSKELSLLNHYLPGRYHGLGR LSDEALNEAYNSAYALLYPSSYEGFGIPILEAMSAGCPVISVNVSSIPEVAGDAAILVQKPTIDELVDGLLAVESERSKL IGYGMKQAAKFSWDKCYQETLDVYKELNK >Mature_348_residues SINLQVNYRFSMKIIYDGIINSLQNMGGVTVYFSELVSRLPATDFYWYSYADEISGFGVGNVKIKSRLLERYRNFSLDTI NYNSLSVFHSSYYRLPDFDIPIVTTVHDFTYEKFVNGPAKWVHSWQKNRAVNNSDLIICVSENTAKDLQMYCSVPSNKIR VIYNGVSDKYHYIKGVKITTNKVIFVGARGGYKNFDIAVKAISKTPHLELSVVGGGAFTSKELSLLNHYLPGRYHGLGRL SDEALNEAYNSAYALLYPSSYEGFGIPILEAMSAGCPVISVNVSSIPEVAGDAAILVQKPTIDELVDGLLAVESERSKLI GYGMKQAAKFSWDKCYQETLDVYKELNK
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 39114; Mature: 38983
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINLQVNYRFSMKIIYDGIINSLQNMGGVTVYFSELVSRLPATDFYWYSYADEISGFGV CEEEEEEEEEEEEEEEHHHHHHHHHHCCCEEEEHHHHHHHCCCCCEEEEEHHHHHCCCCC GNVKIKSRLLERYRNFSLDTINYNSLSVFHSSYYRLPDFDIPIVTTVHDFTYEKFVNGPA CCHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHCCHH KWVHSWQKNRAVNNSDLIICVSENTAKDLQMYCSVPSNKIRVIYNGVSDKYHYIKGVKIT HHHHHHHHCCCCCCCCEEEEECCCCCHHHHEEECCCCCCEEEEEECCCCCEEEEEEEEEE TNKVIFVGARGGYKNFDIAVKAISKTPHLELSVVGGGAFTSKELSLLNHYLPGRYHGLGR ECEEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCC LSDEALNEAYNSAYALLYPSSYEGFGIPILEAMSAGCPVISVNVSSIPEVAGDAAILVQK CCHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHCCCCCEEEEEHHHCCHHCCCEEEEEEC PTIDELVDGLLAVESERSKLIGYGMKQAAKFSWDKCYQETLDVYKELNK CCHHHHHHHHHHHHCCHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SINLQVNYRFSMKIIYDGIINSLQNMGGVTVYFSELVSRLPATDFYWYSYADEISGFGV EEEEEEEEEEEEEEEHHHHHHHHHHCCCEEEEHHHHHHHCCCCCEEEEEHHHHHCCCCC GNVKIKSRLLERYRNFSLDTINYNSLSVFHSSYYRLPDFDIPIVTTVHDFTYEKFVNGPA CCHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHCCHH KWVHSWQKNRAVNNSDLIICVSENTAKDLQMYCSVPSNKIRVIYNGVSDKYHYIKGVKIT HHHHHHHHCCCCCCCCEEEEECCCCCHHHHEEECCCCCCEEEEEECCCCCEEEEEEEEEE TNKVIFVGARGGYKNFDIAVKAISKTPHLELSVVGGGAFTSKELSLLNHYLPGRYHGLGR ECEEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCC LSDEALNEAYNSAYALLYPSSYEGFGIPILEAMSAGCPVISVNVSSIPEVAGDAAILVQK CCHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHCCCCCEEEEEHHHCCHHCCCEEEEEEC PTIDELVDGLLAVESERSKLIGYGMKQAAKFSWDKCYQETLDVYKELNK CCHHHHHHHHHHHHCCHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]